Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00963 ATGTGGTTTCCCACTATACGGTTCCTCATGCCTACTCCATTAAACCTCGATGAGGAGTATGAGAAGATTGTTTATACCAACGTTGACTTTCTTGAAGAGTTTAATAGGTTAGAGGACATTGAATCTAATCCAATTTGGAAAATGGGGTTTGGTCGAAATTCGACGGTGAGAAGTGGAGATTACTTGGAAGGGATGATCAATGACTATGTTGGAGGAAAGGCCAAAGTGAAGGCTCCAAAAAGTGCCTCCACAAAGTTTGTGGCAGCTCTCACATGTCTTCAGTTTTTCTTTGCAGTTTATGCAACATTCCTATTGTATTACATGGGCCCTTCTATAGATTTAAGAACCAAGCCAGATTTTACATGGGCTACAAGAATTGCACAACAATGGAAGCAATTCATGATCACACCCCATGTTGTAGGTCACTACCAAGAAGCTGCTTCTTCTCTCATACAGGAGGAGTTTCAAGCCACAACTCCATCCCTAGTGTGTGAGAATGAGAAGATAGATTTCATGCAAAAGAAGTCCAATGATGTGCAAATGATCAAGTTAAAGAGAGAGCTTTATGAGGAGGTATTGGACTTCCAAAGCAAGACCATTGGCACTGAGACTCTTCAAGAGCTAATGGCAATGAAATCCAAATGGGACTTGAAGGGTCCAAACAGACCAAAAATCACAGTTTTGCTAAACCATTTCAAGAGAAAGACACTTTGTGCTCAGCTTGATTCTTTGCTTCAACAGACCCTCCCATTCCATCATGTTTGGGTGCTTTCATTTGGAAGCCCCAATGAGGTCTCACTCAGGAGAATTGTAGCGAGCTATAATGATTCAAGAATCAGCTTCATAAGCTCAAGTTATGATTTCAAGTACTATGGAAGGTTTCAAATGGCTCTGCAGACTGAAGCTGATTTGGTGTATATTGTTGATGATGACATGATTCCTGGAAGGAAGATGTTGCAGAATTTAGCACATGTGGCTGGGACAGAAAAGTACAAGAACTCTGTTTTGGGAAGTATAGGGAGGATATTGCCTTTTAGGCAGAAGGACTTCACATTTCCCAGTTACAGAAAATTTAGGTCCAAAGAAGCAGGGTTGTATTTGCCTGATCCTGCTTATGATATCACAGTTGACAAAATTGTGCAGGTGGATTTTCTATCCAGCTCATGGTTTTTATCTGCTGAGCTTGTTAAGACACTCTTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCACCTCAGCTATCAGCTTCAAAAGTACAGAAATGCTGGCTCATTTGTTCTTCCAGTAGACCCTAAGGACAAGGAAACTTGGGGTGATAGTGAACACAGGCTTGCATATGTGTCTGAAACCACAGTGATTTTCAAGGACATAGTTCAAGTCAGAGATGACCAATGGTGGAAAGCACTTTCTTCAGGTTATGTGACACAATGGGCAGCAATGCACCCTCAAAAAATTGATGCACTCTTTTATGCTCACTCAATTGATGAAGTGAAAGCACTTGCACCACTTCTTGAAAAGTTCAGGTCCACAGTTGGCAAGAAGGCCTATATTGTTGTATCTGGAGGCAATTTCTGTCCTTGTGAAGATGCTGCAAGAGCTCTTAATTGGCCTTTGTTGGTCTGCAAAGAACGTCGGTTTAAGATTTTTGATTTGGCAATTGGAGCACTCTCTGGGGTATCAAACTCAGAGGCACCAGTAGTACAAGCAGTGTACTCTAGCATGAAGGGGTTGATCAAAATTCACAATCCTAGTGTAGTTATCACTGTAGCTGACGTTGACCCTAATGTGAGAAAGGCTCTAAAGATGGCATCAGAAACTAAATCAAATGGCACCACATTGGTTCTTTTACCCAGGGCTTCAGTGTCTAAAGTTCTTTGGATGGCTGATCTACGTTCAACAGCATTGCCAAATTGGAATAGGATGAGGGTTTCTGTCAACATCATCACCCAAAATAGAGCCAATTCACTAGCAAGGCTTCTCAAATCTCTCAGCAATGCCTACTATCTAGGAGATGAAGTTCCCATTACTTTCAATATGGATAGCAAGGTAGATGAGGCAACTGTAAGACTAGTAGGTTCATTTGAGTGGCCTCATGGGCCCAAAACCCTCAGAAGGAGAATCATCCAAGGTGGGCTCATCAGAGCTGTGAGTGAGAGTTGGTATCCATCTTCTGATGATGACTTTGGGCTCTTACTTGAAGATGACATAGAGGTTTCTCCTTACTATTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGACCCCCAAGTCTCTCTCCCTGAACTCTCTTCCATCTCCCTCTACACTCCAAAACTTGTTGAAGTTGTCAAAGAGAGGCCTAAATGGAATGCCACAGAATTCTTCAAAAACATCCATCCCAACACACCTTACCTTCACCAACTACCTTGCAGTTGGGGAGCAGTGTTCTTCCCTAAGCATTGGAGAGAGTTCTATGTGTATATGAACATGAGGTTCACAGAGAATGCTAAGACAAACCCAGTTCAAATTCCAAAGTCTAGAACAAATGGATGGCAAGCTTCATGGAAGAAGTTCCTTATAGACATGATGTACCTTAGAGGGTATGTAAGTCTCTATCCAAATTTCCCACAACAAGCTAGCTTTTCAACCAACCATATGGAACCAGGGGCACATATTAGTGCTAAAGATAACGTGGTTAAGCATAAGAAACTGGACTTTGAGGTGCCATTGTTGAAGGAAGATTTTAGCAACTTGTTGCCAGGAATGAAAATGCCTCCAGCTTCAAGGTTACCATCTCTTAACCTCTTCAATCAACCAATTTCTCTTAAAGGTCTCAAAGCTGCTGGAGCTAAGTTAGGCCAAGATGTGCTGAGATGTGACAATGCCACTGAACTAGTTATTGTTGATCATGGTACAGGTCTACCACACAGCTGCTCCAAATTCTGA 2940 0.4194 MWFPTIRFLMPTPLNLDEEYEKIVYTNVDFLEEFNRLEDIESNPIWKMGFGRNSTVRSGDYLEGMINDYVGGKAKVKAPKSASTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPDFTWATRIAQQWKQFMITPHVVGHYQEAASSLIQEEFQATTPSLVCENEKIDFMQKKSNDVQMIKLKRELYEEVLDFQSKTIGTETLQELMAMKSKWDLKGPNRPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHVWVLSFGSPNEVSLRRIVASYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGRKMLQNLAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFIETPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSSGYVTQWAAMHPQKIDALFYAHSIDEVKALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAARALNWPLLVCKERRFKIFDLAIGALSGVSNSEAPVVQAVYSSMKGLIKIHNPSVVITVADVDPNVRKALKMASETKSNGTTLVLLPRASVSKVLWMADLRSTALPNWNRMRVSVNIITQNRANSLARLLKSLSNAYYLGDEVPITFNMDSKVDEATVRLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKNIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENAKTNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHKKLDFEVPLLKEDFSNLLPGMKMPPASRLPSLNLFNQPISLKGLKAAGAKLGQDVLRCDNATELVIVDHGTGLPHSCSKF* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00963 979 PANTHER OSJNBA0004B13.7 PROTEIN 327 970 - -
Rops3g00963 979 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 208 432 IPR029044 -
Rops3g00963 979 CDD Glyco_tranf_GTA_type 235 326 - -
Rops3g00963 979 SUPERFAMILY Nucleotide-diphospho-sugar transferases 643 830 IPR029044 -
Rops3g00963 979 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 646 894 IPR029044 -
Rops3g00963 979 SUPERFAMILY Nucleotide-diphospho-sugar transferases 222 423 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00963 Rops-Chr3 12310557 12316663 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00963 - - gsj:114374559 1749.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00963 3 12310557 12316663 Rops3g00963 3 12310557 12316663 ECH