Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00960 ATGGATCCTGCTCTCAAGTTTTGCGTGTTGTTGATCCTCGTTGGATTAGTGAGTGCTTCTTTTGCTGAAAATGATTTTGGACACTGTGAAAGAGTTGTTAAGAGTTGGGCGCGTTCTTCGCTGGATAGAGAAATTAAACAAGAAGATAAGCATACACTGAGGGATTTGCTGTTTTTCCTTCATGTTCCCAGAACTGGAGGACGCACTTATTTTCACTGCTTTTTGAAAAAATTGTATCCAAGCTATCTGGAATGCCCTCGCTCTTATGATAAGTTGCGGTTTGATCCAAGCAAACCAAAATGCAGGCTGTTGGTTACACATGATGACTATAGCATTACATCCAAACTTCCAAGGGAGAGAACTTCTGTGGTTACCATACTTAGGGATCCAGTTGACCGTGTCTTTAGTACTTATGAATTTTCAACAGAGGTTGCAGCTAGATTTTTGGTGCATCCAAACTTGACATCTGCAACACAGATGGCTTTACGCTTGCGCTCTAAGACTAAAGGAGTGAGCACACTGGATATCTGGCCATGGAAGTATCTGGTTCCGTGGATGAGGGAAGACCTATTTGCTAGGAGAGATGCTAGGTATAGTAGGGGACTGAATACCGTTGAGAGCGATGATCCTTATGACATGGAAGATTTTGCAATGCCATTACACGAATACATCAATCATCCTGTGGCTGGGGATATTGTACATAATGGAGCCACATTCCAGGTTGCAGGTTTGACAAACAATTCTTATATAGCAGAAGCACATGAAGTGCGCCATTGTGTACAGAAATATAAGATTCTTGGTAAATATGTGCTACAAGTTGCGAAGAAGAGACTGGATGATATGTTATACGTTGGTCTTACAGAGGAGCACAGAGAATCTGCAACAATGTTTGCAAATGTGGTTGGTGCTCAGGTGATATCACAGCTTAATGCACCAAATGCAAGCCTGGATATTACTGATAACACAGAACAGAGTTCATTTTCAGATTCTGATCCTGATAGCAGTGAACATCAGAATAGCACCTTAGACAGGGGAGCAAGTGAAGTTACTTCAAGTGAAGGTGGAGAAGCAACAGAATTAAATATGACTGCTGGAAAACTCATGGATGCTTATGAAGTTTGTATTTCTAAGTTACGGAAGGCCCAGTCACGCCGACGCATCTCTTCTTTGAAGAAGATTTCTCCGGTGAACTTTTCAAAGGAGGCACGTATTCAGGTTTCTGAAGAGGTTCTCCAGGAGATACGGTCTCTCAATGACCTTGACTTGGAGCTCTATGAATATGCGAGAGCCATTTTCTATAAGCAACATAAAACCTCATTGCTGATCACTAGGGAGAGATGGGACAACATATCAAGCAGTGCATATGGCATCATCCTCTGGAAGTTCCTTACATTAGCAGTTACTTTTGTCCTGATCCTTTTCTTATTCTTTCTAATTGTAAACGTGAGAAGAAGAACATCGAAGGTTAAGAAGTGA 1476 0.416 MDPALKFCVLLILVGLVSASFAENDFGHCERVVKSWARSSLDREIKQEDKHTLRDLLFFLHVPRTGGRTYFHCFLKKLYPSYLECPRSYDKLRFDPSKPKCRLLVTHDDYSITSKLPRERTSVVTILRDPVDRVFSTYEFSTEVAARFLVHPNLTSATQMALRLRSKTKGVSTLDIWPWKYLVPWMREDLFARRDARYSRGLNTVESDDPYDMEDFAMPLHEYINHPVAGDIVHNGATFQVAGLTNNSYIAEAHEVRHCVQKYKILGKYVLQVAKKRLDDMLYVGLTEEHRESATMFANVVGAQVISQLNAPNASLDITDNTEQSSFSDSDPDSSEHQNSTLDRGASEVTSSEGGEATELNMTAGKLMDAYEVCISKLRKAQSRRRISSLKKISPVNFSKEARIQVSEEVLQEIRSLNDLDLELYEYARAIFYKQHKTSLLITRERWDNISSSAYGIILWKFLTLAVTFVLILFLFFLIVNVRRRTSKVKK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00960 491 Gene3D - 371 451 IPR027417 -
Rops3g00960 491 PANTHER HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 7 438 IPR010635 GO:0008146|GO:0016020
Rops3g00960 491 MobiDBLite consensus disorder prediction 317 358 - -
Rops3g00960 491 Gene3D - 52 344 IPR027417 -
Rops3g00960 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 147 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00960 K22218 - gmx:100810026 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00960 3 12253692 12259577 Rops3g00960 3 12253692 12259577 ECH