Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00936 ATGGCTGGAAGAAAGTGGAACATCTTGGTGATCTTCTGCATCTTACTTATCGTTATGGAAGGTGCCATTGCTGCTGAAGACCGAGGAAACGGTGAAGAAAAAGGTGACGACGACAACAAAGCCAAAGGAAAAGGCAATGACAATGGCAATGGCAAAGGGGATAATAATAAGGATGATGACAAGGGAAAGGGTAAGGAAAAGGGCCAGGAGGATGGCGAAGGAAAAGGGAAAGATAAAAAGCCAAAAAAGAAGGATTCATATGATGCCACCTCAGATTATGACTCATTGACACGTCTGCCCAGTGGACAAGAACGAGCATTCTGCAAAGCAAAAAGTTCCTGTCAGTTCAAGACCCTCGTGTGTCCAGCTGAGTGCCCAGAGAGGAAGCCCAAGAAGAATAAGAAGAACAAGGGATGTTTCGTTAACTGCGGCAGCAAATGTGAAGCCACTTGCAAGTTTAGAAGATCCAACTGTGATGGCTATGGTTCTCTGTGTTACGATCCTCGCTTTGTTGGTGGTGACGGTGTGATGTTCTACTTCCATGGTGAAAAAGGAGGAAACTTCACCATCGTTTCTGATGATGAATACCAAATCAATGCTCACTTCATTGGTGCTCGACCAAAGGGAAGGCCTCGTGACTATACATGGGTGCAAGCACTTGCTGTCATGTTTGACACACACACTCTTGTCTTTGAAGCCAACAAAGTATCTCACTGGGATGACAAGGTTGACTCTCTTACAGTGAAGTGGGATCGTGAAATAGTCACAATTCCCAATGATGAAGAGGCTGAATGGAGGGCTAATGGTGATGAAAGAGATGTGGTTGTGGAGAGAACTGATGACACCAACAATGTGAGAGTGACAGTTTCAGGTTTGGTTGAAATAGACATAAGGGTGAGGCCCATTGGAGCTCTAGAAAACAAGGTTCACAACTACCAGTTACCATCAAATGATGCTTTTGCTCATTTGGAGTTACAGTTCAGGTTTAAAAAACATACAGATCATATTGAAGGAGTTTTGGGTAAGACTTATAGGCCAGGCTATGTTAGCACTGTCAAGAGAGGGGTTCCTATGCCAATGATGGGAGGTGAGGACAAGTATAGGACTCCTTCTCTCTTATCAACATCCTGCAATGTTTGCAAGTTCAAGAGGCCATCCGGGTCTGCTACCAGTGAAAGACTAATTTCTCAATACTGA 1197 0.4428 MAGRKWNILVIFCILLIVMEGAIAAEDRGNGEEKGDDDNKAKGKGNDNGNGKGDNNKDDDKGKGKEKGQEDGEGKGKDKKPKKKDSYDATSDYDSLTRLPSGQERAFCKAKSSCQFKTLVCPAECPERKPKKNKKNKGCFVNCGSKCEATCKFRRSNCDGYGSLCYDPRFVGGDGVMFYFHGEKGGNFTIVSDDEYQINAHFIGARPKGRPRDYTWVQALAVMFDTHTLVFEANKVSHWDDKVDSLTVKWDREIVTIPNDEEAEWRANGDERDVVVERTDDTNNVRVTVSGLVEIDIRVRPIGALENKVHNYQLPSNDAFAHLELQFRFKKHTDHIEGVLGKTYRPGYVSTVKRGVPMPMMGGEDKYRTPSLLSTSCNVCKFKRPSGSATSERLISQY* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00936 398 MobiDBLite consensus disorder prediction 28 91 - -
Rops3g00936 398 MobiDBLite consensus disorder prediction 28 97 - -
Rops3g00936 398 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 7 386 - -
Rops3g00936 398 Pfam Root cap 326 382 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00936 Rops-Chr3 11900824 11902593 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00936 - - lja:Lj3g3v3086010.1 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00936 3 11900824 11902593 Rops3g00936 3 11900824 11902593 ECH