Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00933 ATGATCTTTTGTTCTTCCACCACCACTTTAGCCCAGTCACCTGCTGCAGCTCCATCACCACCCATTACAGCCCCATCCCCAGCACCCTCATCACCTCCCACAGACATCATCAGAATCCTAAAAAAAGCTGGAGGGTTCACCACTCTAATCCGTCTTCTTCAGACCACCCAAGTATCTACCCAGATCAACTCTCAACTCCTAAACTCAAACGGTGGTTTAACCTTCTTTGCACCCAATGACAATGCCTTTTCCAGTCTCAAACCTGGCTTCCTCAATTCCCTCAATGATCAACAAAAGAACGAGCTCATCCAATTCCACTTGCTACCCACATATACTTCCTTGTCAAATTTTGATACTTTAAGCAACCCAGTGAGAACACAGGCTGGTGCAGACCCTGATAGGTTGGCACTGAACGTAACCGGTTCAGGAAACCAGGTGAACATGACAACAGGGATTGTTAATGCCACAGTTGGTGGTACTGTTTACACGGATCACCAACTCGCTGTTTACCAAGTGGATAAGGTGCTTCTTCCTCGTGACTTCTTCGAAGCTAAGCCTCCAGCACCAGCTCCTGCACCAGAAAAGGCTAAGGCCTCTAAGAAGAAATCTGCAGATAGCACAGAAGCTCCAGCAGATGATGACTCTGCTGCTATGAGTGTGAAACAGCAGCATCTGATGTGGGTTCCCCTTGCAGTTGCTATGGTTGTGGTAGCAGCATTTTCATGGTGA 729 0.476 MIFCSSTTTLAQSPAAAPSPPITAPSPAPSSPPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTFFAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPTYTSLSNFDTLSNPVRTQAGADPDRLALNVTGSGNQVNMTTGIVNATVGGTVYTDHQLAVYQVDKVLLPRDFFEAKPPAPAPAPEKAKASKKKSADSTEAPADDDSAAMSVKQQHLMWVPLAVAMVVVAAFSW* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00933 242 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 237 IPR045003 -
Rops3g00933 242 FunFam Fasciclin-like arabinogalactan protein 11 6 178 - -
Rops3g00933 242 SMART fasc_3 74 179 IPR000782 -
Rops3g00933 242 Gene3D FAS1 domain 13 179 IPR036378 -
Rops3g00933 242 SUPERFAMILY FAS1 domain 10 179 IPR036378 -
Rops3g00933 242 MobiDBLite consensus disorder prediction 1 16 - -
Rops3g00933 242 MobiDBLite consensus disorder prediction 1 34 - -
Rops3g00933 242 MobiDBLite consensus disorder prediction 18 32 - -
Rops3g00933 242 MobiDBLite consensus disorder prediction 195 209 - -
Rops3g00933 242 Pfam Fasciclin domain 45 178 IPR000782 -
Rops3g00933 242 ProSiteProfiles FAS1/BIgH3 domain profile. 33 176 IPR000782 -
Rops3g00933 242 MobiDBLite consensus disorder prediction 185 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00933 Rops-Chr3 11852757 11853870 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00933 - - gmx:100818760 314.694