Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00932 ATGAAGCAAGCTTTGTTTTCCCTCATACTCCTCATGCTCTTTTCCTCTTTGTCTTCAACCACAACATTAGCTCAAGCGCCTGCTGCAGCCCCATCAAAACCAATTGTCCCCTCACTACCCCAATCACCCTCTTCAGATGCCTCTGATTCTTCCACTGATGACATCATCAAAATCCTGAGGAAGGCCAAATCATTCAACATCTTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAAATCAATTCACAGCTCATAACCACAAACTCTGGTGGTGGCTTAACAATTTTTGCACCAGATGATGGAAGCTTTTCACAACTCAAAGCAGGGTTTCTCAACTCTCTTGGTGACAATCAAAAGATAGAACTTTTACAGTTCCACGTTCTACCCATTTTTGTTTCAAGCTCAAACTTCGATTCTCTCACCAACCCTGTAAGAACACTGGCCGGTGATCATCCTGGAAGGTTGCAACTAAACGTGACTGCTTTTGGAAACAGTGTGAATATCTCAACAGGAGTGGTTGATGCCACACTCACAGGAGTTGTATACTCTGATAAGCAACTTGCAATATATCATGTGGATAAGGTGCTTCTTCCTTTGGACTTCTTCAAGCCTAAGCCTCCAGCTCCCGCACCCTCTCTTGAAATAGCACCAAAAGCTGATAAGGATAACTCATCTGAAGATGATGATCATGTTGGAACATCTAAGGACAGCTCTGGTGCAATCAGTTTGACAAGCATTCAAGGAACAACGTTGGTGTCTTCCCTTGGAGTTGCTTTATTTATTGCATTGATGACCTTATTAAGTTAA 810 0.4272 MKQALFSLILLMLFSSLSSTTTLAQAPAAAPSKPIVPSLPQSPSSDASDSSTDDIIKILRKAKSFNILIRLMKTTQLINQINSQLITTNSGGGLTIFAPDDGSFSQLKAGFLNSLGDNQKIELLQFHVLPIFVSSSNFDSLTNPVRTLAGDHPGRLQLNVTAFGNSVNISTGVVDATLTGVVYSDKQLAIYHVDKVLLPLDFFKPKPPAPAPSLEIAPKADKDNSSEDDDHVGTSKDSSGAISLTSIQGTTLVSSLGVALFIALMTLLS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00932 269 MobiDBLite consensus disorder prediction 220 235 - -
Rops3g00932 269 FunFam Fasciclin-like arabinogalactan protein 11 38 199 - -
Rops3g00932 269 Gene3D FAS1 domain 36 199 IPR036378 -
Rops3g00932 269 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 247 IPR045003 -
Rops3g00932 269 MobiDBLite consensus disorder prediction 31 51 - -
Rops3g00932 269 Pfam Fasciclin domain 64 199 IPR000782 -
Rops3g00932 269 MobiDBLite consensus disorder prediction 213 239 - -
Rops3g00932 269 SUPERFAMILY FAS1 domain 49 200 IPR036378 -
Rops3g00932 269 ProSiteProfiles FAS1/BIgH3 domain profile. 52 197 IPR000782 -
Rops3g00932 269 SMART fasc_3 95 200 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00932 Rops-Chr3 11846414 11847471 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00932 - - gmx:100791112 328.946