Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00930 ATGAAACAAGCAGCTCTCTTCTCCTTCTCACTCTTCTTCCTACTCTTTTCTTCCACCTTGGCCATTTCACCTGCACCTGCTGCAGCCCCAAAAGCCCCAGCAAAAACACCACCTACCCCAAAGGCCACAGCACCAGCAAAAACACCCCCTACCCCAAAGGCCACCGCACCGGCACCAAAACCATTAGTCCCCACATTACCTCAGTCTCCAGAATCCTCAGATTCTGTCCCTGATGACATCACCAGAATCCTCAAAAAGGCCAAAATATTCTCAGTCCTAATCCGTCTCCTGAAAACCACAGAAATCATGAACAACATAAACTCACAGCTCATCACAGCAAAGAGTGGTGGCATAACCATCCTTGCACCTGATGATTCTGCATTTTCAAACCTCAAAGCAGGATTCCTCAACTCCCTAAACGAAGGCCAAAAGATAGAGCTTGTACAGTTCCACATCTTGCCCGAGTATGTCTCAAGCTCAAACTTCGATTCTCTCAGCAACCCAGTTCAGACAGTGGCTGGTAAAGACCCCACAAGGCTTCCACTCAATGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTTGTCAATGCCTCCATTGTTGGGGTTGTCTACTCGGATAACAAACTTGCCATTTATCATATGGACAAAGTGCTTCTCCCTCTTGACTTTTTTGTAACCAAGGCTGCTCCAGCTTTGGCTCCAACTCTTGCAGATGCAAAGGCTCCTAAAGCTGATAAGGACAACTCTTCAGCAGATGATCAAGATGAGACAACACAGGATAAGGATAAATCTGGAGCAGTGAGTTTGATGAGCATTCCTGGAACAATAGCTTTAGTCGCAGTAGCAATGATGTGGATTTGA 870 0.4621 MKQAALFSFSLFFLLFSSTLAISPAPAAAPKAPAKTPPTPKATAPAKTPPTPKATAPAPKPLVPTLPQSPESSDSVPDDITRILKKAKIFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEYVSSSNFDSLSNPVQTVAGKDPTRLPLNVNALGNSVNISTGVVNASIVGVVYSDNKLAIYHMDKVLLPLDFFVTKAAPALAPTLADAKAPKADKDNSSADDQDETTQDKDKSGAVSLMSIPGTIALVAVAMMWI* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00930 289 SUPERFAMILY FAS1 domain 70 224 IPR036378 -
Rops3g00930 289 ProSiteProfiles FAS1/BIgH3 domain profile. 77 221 IPR000782 -
Rops3g00930 289 MobiDBLite consensus disorder prediction 243 265 - -
Rops3g00930 289 FunFam Fasciclin-like arabinogalactan protein 11 65 223 - -
Rops3g00930 289 Gene3D FAS1 domain 64 223 IPR036378 -
Rops3g00930 289 MobiDBLite consensus disorder prediction 241 267 - -
Rops3g00930 289 MobiDBLite consensus disorder prediction 27 77 - -
Rops3g00930 289 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 284 IPR045003 -
Rops3g00930 289 Pfam Fasciclin domain 90 223 IPR000782 -
Rops3g00930 289 SMART fasc_3 119 224 IPR000782 -
Rops3g00930 289 MobiDBLite consensus disorder prediction 30 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00930 Rops-Chr3 11835634 11836714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00930 - - gmx:100795316 349.362