Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00926 ATGATGAAAAAGCAATCTCTCTTGTCCATCTCACTTGCAATACTAGTTTGCTTCTTATGTTCCACCACCATTTTAGCCCAATTATCCCCTGCAGTTTCCCCAGTACAACCTGCCAAACCTACCCCAACTCCACCAGCAGCAGCCCCAAAACCATTGGTTCCTTCATTACCAGAGTCACCAAGTGACAGCACCCCTGACACTGCAGCAGCAGTTGACATCGTTGGAATCCTTAGAAAGGCAAAGTCATTCAATGTCCTAATTCGTCTCATGAAAACCACCCAATTGATCAACCAAATCAATTCACAGCTCTTAACCACAAAATCAGGTGGCATTACCATTCTTGCACCTGATGACAGCGCCTTCTCAGAACTCAAAGCAGGATTCCTCAACTCTCTTTCTGATGGACAGAAGCTCGAGCTCTTACAGTTCCACGTTCTTCCAGACTATGTCTCTAGCTCTAACTTCGATACTCTCACAAACCCAGTGAGAACACTTGCAGGGGCCAGACCTGGAAAGGTGGAACTGAATGTAGTAAGTTACGGTGGGAGTGTGAACATCTCAACAGGGGAGGTTAACACAACCATCAATGGCATTATATATACTGATAAGCATCTTGCTATTTATAAGGTTGGAAAGGTTCTTCTTCCTATGGACTTCTTTGCAGTTGCTAAGGCACCAGCAAAGGCACCCTCTTTGGCACCAGAACCTTCAGCTGATACAGCAAAAGCACCTAAATCTGATAAAGATACAGAATCATCCTCAGAATCGTCACAGGTTAACCCCACTGAACAAAACTCAGGCTCTGTGAAGATCGGTGTGTATGGAAATTGGGTCTCACTTGGACTTGCATTTGTGGCAGCCATGATGCAAACCTGA 876 0.4509 MMKKQSLLSISLAILVCFLCSTTILAQLSPAVSPVQPAKPTPTPPAAAPKPLVPSLPESPSDSTPDTAAAVDIVGILRKAKSFNVLIRLMKTTQLINQINSQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLPDYVSSSNFDTLTNPVRTLAGARPGKVELNVVSYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSADTAKAPKSDKDTESSSESSQVNPTEQNSGSVKIGVYGNWVSLGLAFVAAMMQT* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00926 291 MobiDBLite consensus disorder prediction 33 64 - -
Rops3g00926 291 Pfam Fasciclin domain 82 216 IPR000782 -
Rops3g00926 291 Gene3D FAS1 domain 56 216 IPR036378 -
Rops3g00926 291 MobiDBLite consensus disorder prediction 230 266 - -
Rops3g00926 291 FunFam Fasciclin-like arabinogalactan protein 11 55 216 - -
Rops3g00926 291 MobiDBLite consensus disorder prediction 35 58 - -
Rops3g00926 291 ProSiteProfiles FAS1/BIgH3 domain profile. 70 205 IPR000782 -
Rops3g00926 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 269 IPR045003 -
Rops3g00926 291 SUPERFAMILY FAS1 domain 68 217 IPR036378 -
Rops3g00926 291 SMART fasc_3 112 217 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00926 Rops-Chr3 11822806 11823681 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00926 - - gmx:100819833 427.943