Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00925 ATGCTGTTGAAGAAGCAATCACTCTTCTTGTCCTTCTCACTTGCACTACTAGTTTCCCTCTCGTGTTCCACCACCATTTTAGCCCAGTTAACCCCTGCTGCTGCCCCACTACAACCTGCCAAACCTACCCCAACCCCACCAGCCGCAGCCCCAAAACCATTGGTCCCCTCATTGCCACAGTCACCGAGTGACAATGCACCAGCCGTTGACACTGCACCAGCAGTTGACATTATCGGAATCCTGAGGAAGGCAAAGTCATTCAATGTCCTAATCCGTCTCATGAAAACCACCCAATTGATCAACCAACTAAACTCACAGCTCTTAACTACAAAATCAGGTGGCATCACCATTCTTGCACCCGATGACAGCGCCTTCTCAGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGACAGAAGCTAGAGCTCTTGCAATTCCACGTTCTTCCAGACTATGTTTCTAGCTCTAACTTCGATACTCTCACAAACCCAGTGAGAACACTTGCTGGAGCCAAACCAGGAAGGGTGGAACTGAATGTGATAAGTTACGGTGGGAGTGTGAACATCTCAACAGGGGAGGTTAACACCACCATCAATGGAATTATATATACTGATAAACATCTTGCTATTTATAAGGTGGGGAAGGTGCTTCTTCCTATGGACTTCTTTGCAGTTGCTAAGGCACCAGCAAAGGCACCGTCTTTGGCACCAGAGCCTTCAGCTGATACAGCAAAAGCACCTAAAGCTGATAAGGATACAGCATCATCCACAGATTCGTCACTGGTTAACTCCACTGAACAGAACTCAGGCTCTGTGAAGATGAGTGAGTATGGAAAGTGGGTGTCACTTGGACTTGCATTAGTGGCAGCCATGGTGCAAACCTGA 888 0.4764 MLLKKQSLFLSFSLALLVSLSCSTTILAQLTPAAAPLQPAKPTPTPPAAAPKPLVPSLPQSPSDNAPAVDTAPAVDIIGILRKAKSFNVLIRLMKTTQLINQLNSQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLPDYVSSSNFDTLTNPVRTLAGAKPGRVELNVISYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSADTAKAPKADKDTASSTDSSLVNSTEQNSGSVKMSEYGKWVSLGLALVAAMVQT* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00925 295 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Rops3g00925 295 MobiDBLite consensus disorder prediction 38 67 - -
Rops3g00925 295 MobiDBLite consensus disorder prediction 254 269 - -
Rops3g00925 295 FunFam Fasciclin-like arabinogalactan protein 11 57 220 - -
Rops3g00925 295 MobiDBLite consensus disorder prediction 38 60 - -
Rops3g00925 295 MobiDBLite consensus disorder prediction 234 269 - -
Rops3g00925 295 Gene3D FAS1 domain 58 220 IPR036378 -
Rops3g00925 295 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 273 IPR045003 -
Rops3g00925 295 SMART fasc_3 116 221 IPR000782 -
Rops3g00925 295 Pfam Fasciclin domain 86 220 IPR000782 -
Rops3g00925 295 ProSiteProfiles FAS1/BIgH3 domain profile. 74 209 IPR000782 -
Rops3g00925 295 SUPERFAMILY FAS1 domain 69 221 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00925 Rops-Chr3 11804314 11823462 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00925 - - gmx:100819833 391.349