Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00923 ATGATGTTGAAGAAGCAATCTCTCTTGTCCATCTCACTTACACTCCTAGTTTCCCTCTTGTGTTCCACCACCATTATAGCCCAATTATCACCCGTTGGTGCCCCAGTACAACCTGCCAAACCTACCCCAACTCCACCACCAGCCGCAGCCCCAAAACCATTGGTTCCCTCATTGCCAGATTCACCAAGTGACAGTGCACCAGCCGTTGACACTGCACCAGCAGTTGACATCATCGGAATCCTGAGGAAGGCAAAGTCATTCAATGTCCTGATTCGTCTCATGAAAACCACCCAATTGATCAACCAAATCAATTCACAGCTCTTAACCACAAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGCTCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGACAGAAGCTAGAGCTCTTGCAGTTCCACGTTCTTCCAGACTATGTCTCTAGCTCTAACTTCGATACTCTCACAAACCCTGTTAGAACACTTGCAGGAGCCAAACCAGGAAGGGTGGAACTGAACGTGATCAGTTATGGTGGGAGTGTGAACATCTCAACAGGGGAGGTTAACACCACCATCAATGGCATTATATATTCGGATAAGCATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCTATGGACTTCTTTGCAGTTGCTAAGGCACCAGCAAAGGCATCCTCTTTGGCACCAGAACCTTCAGCTAATGCGCCTAAATCTGATAAGGAGAAGCCATTGTCACCGGATTCCTCAGAATCATCTCAGATCAATACCACAAACGACAACTCTGGCGCTGTGAAAATCATTGCGTATGGAAAATGGGTGTCCCTAGTGCTTGGAGTAGTTCTCGTGACCATATTGTCAACATAG 891 0.4691 MMLKKQSLLSISLTLLVSLLCSTTIIAQLSPVGAPVQPAKPTPTPPPAAAPKPLVPSLPDSPSDSAPAVDTAPAVDIIGILRKAKSFNVLIRLMKTTQLINQINSQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVLPDYVSSSNFDTLTNPVRTLAGAKPGRVELNVISYGGSVNISTGEVNTTINGIIYSDKHLAIYKVGKVLLPMDFFAVAKAPAKASSLAPEPSANAPKSDKEKPLSPDSSESSQINTTNDNSGAVKIIAYGKWVSLVLGVVLVTILST* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00923 296 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 286 IPR045003 -
Rops3g00923 296 MobiDBLite consensus disorder prediction 36 60 - -
Rops3g00923 296 SMART fasc_3 116 221 IPR000782 -
Rops3g00923 296 MobiDBLite consensus disorder prediction 34 67 - -
Rops3g00923 296 Pfam Fasciclin domain 86 220 IPR000782 -
Rops3g00923 296 SUPERFAMILY FAS1 domain 69 221 IPR036378 -
Rops3g00923 296 ProSiteProfiles FAS1/BIgH3 domain profile. 74 218 IPR000782 -
Rops3g00923 296 MobiDBLite consensus disorder prediction 235 266 - -
Rops3g00923 296 Gene3D FAS1 domain 60 220 IPR036378 -
Rops3g00923 296 FunFam Fasciclin-like arabinogalactan protein 11 57 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00923 Rops-Chr3 11803535 11804425 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00923 - - gmx:100790242 386.341