Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00922 ATGATGTTGAAGAAGCAATCTCTCTTCTCCATCTCACTTGCACTCCTAGTTTCCCTCCTGTGTTCCACCACCATTTTAGCCCAATTATCACCCGTTGGTGCCCCAGTACAACCTGCCAAACCTACCCCAACCCCACCACCAGCCGCAGCCCCAAAACCATTGGTTCCCTCATTGCCAGATTCACCAAGTGACAGTGCACCAGCCGTTGACACTGCACCAGCAGTTGACATCATCGGAATCCTGAGGAAGGCAAAGTCATTCAATGTCCTGATTCGTCTCATGAAAACCACCCAATTGATCAACCAAATCAATTCACAGCTCTTAACCACAAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGCTCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGACAGAAGCTCGAGCTCTTACAGTTCCACGTTCTTCCAGACTATGTCTCTAGCTCTAACTTCGATACTCTCACTAACCCAGTGAGAACACTTGCAGGGGCCAGACCTGGAAAGGTGGAACTGAATGTAGTAAGTTACGGTGGCAGTGTGAACATCTCAACAGGGGAGGTTAACACAACCATCAATGGCATTATATATACTGATAAGCATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCTATGGACTTCTTTTCAGTTGCTAAGGCACCAGCAAAGGCACCTTCTTTGGCACCAGAACCTTCAGCCGATGCGCCTAAATCTGATAAGGAGAAGCCATTATCACCGGATTCCTCAGAAACATCACTGACTAATCCTACAATCAACAACTCTGGCACTGTGAAAATCATTGTGTTTGGAAAATGGGTGTCACTAGTTCTTGGAGTAGTTCTCGTGACCGTATTGTCATCATAA 891 0.4658 MMLKKQSLFSISLALLVSLLCSTTILAQLSPVGAPVQPAKPTPTPPPAAAPKPLVPSLPDSPSDSAPAVDTAPAVDIIGILRKAKSFNVLIRLMKTTQLINQINSQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVLPDYVSSSNFDTLTNPVRTLAGARPGKVELNVVSYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPMDFFSVAKAPAKAPSLAPEPSADAPKSDKEKPLSPDSSETSLTNPTINNSGTVKIIVFGKWVSLVLGVVLVTVLSS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00922 296 MobiDBLite consensus disorder prediction 36 60 - -
Rops3g00922 296 MobiDBLite consensus disorder prediction 34 67 - -
Rops3g00922 296 Pfam Fasciclin domain 86 220 IPR000782 -
Rops3g00922 296 FunFam Fasciclin-like arabinogalactan protein 11 57 220 - -
Rops3g00922 296 ProSiteProfiles FAS1/BIgH3 domain profile. 74 209 IPR000782 -
Rops3g00922 296 MobiDBLite consensus disorder prediction 233 265 - -
Rops3g00922 296 Gene3D FAS1 domain 60 220 IPR036378 -
Rops3g00922 296 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 274 IPR045003 -
Rops3g00922 296 SMART fasc_3 116 221 IPR000782 -
Rops3g00922 296 SUPERFAMILY FAS1 domain 69 221 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00922 Rops-Chr3 11794322 11795212 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00922 - - gmx:100792674 388.652