Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00902 ATGTCGGCACCACAGAGGTTACTCTGCACTCTCTCTCACCACACCCTCCCTCTTCCTTCACCTTCGCTTTCTAGAACCTCCCTTTTCCTTCCCTTCGCTCACCAATACTGGACCATAACTCCTTCTACAATGCCTCGCAATCAGCCAAGTGAACAAAGGTGGAAAGAGAAACCCAAAAATGAAGATCAATTATCCGCTACGGGAGATGCAGCTGCAACTGCTGCTGAAACCGTTACTAACAAACTTGCTGGAATGCATATCGGTGATAGCAGTGATGTCCAGCATGGTATCAAAGGTACCGTTCAAGGTTCAACGGCAATTTGGAAACCTAAATCTTATGGAACTGCTAGTGGAGGAGCCACTGCAACGGAAGTTGATGGTAGAAAGGTTGATGCTGATATGGCTTCAACTCAGAAAAACAGTAGTAGTAGTACTGGTTTGAGTAAGTTATTTCGTGGTAATCTGTTAGAGAATTTCACTGTGGACAACTCCACTTACTCACATGCACAAATCAGAGCAACTTTCTACCCCAAATTTGAAAATGAAAAGTCTGATCAAGAGGTCAGGACAAGGATCATTGAGATGGTATCAAAAGGGCTGGCTACCTTGGAGGTTTCACTTAAACACTCTGGTTCTCTTTTTATGTATGCGGGTCATGAGGGCGGAGCTTATGCAAAAAACAGTTTTGGAAATATATATACTGCTGTTGGTGTATTTGTTCTTGGACGGATGTTTCGTGAGGCTTGGGGAACTGAAGCTTCAAAAAAACAAGCCGAGTTTAATAATTTTCTTGAGAGAAACAATATGTGCATATCAATGGAACTGGTAACTGCTGTTCTTGGAGACCATGGACAGCGTCCCAACGAAGATTATGTGGTAGTTACGGCAGTCACTGAACTAGGAAATGGAAAGCCAAAGTTCTATTCAACTCCTGAGATAATTGCTTTTTGCAGAAAATGGCGCCTACCAACAAATCATGTGTGGTTGTTTTCAACCAGAAAATCGGCTTCTTCCTTCTTTGCTGCCTATGATGCCTTATGTGAGGAAGGTACTGCAACGCCTGTATGCAAGGCTCTTGATGAAATTGCAGATGTATCTGTGCTAGGTTCAAAAGACCATGTAAAAGCCCAAGGGGAAATTTTAGAGGGTCTTGTGGCTCGTCTTGTGAGTCATGAGAGTTCAAACCATATAGAGAAAGTTTTGAAAGAGTTTCCCCCTCCACCTGCTGATGGAGTTGCCCTTGATTTTGGACCAAGTCTAAGGGAAATTTGTGCAGCAAATAGATCTGATGAAAAGCAGCAAATAAAAGCACTTCTCGAGAGTGTTGGTAGCTCTTTTTGTCCTGACTACTCAGATTGGTTTGGGCTTGATGCTTCTGATTCTCATTCAAGAAATGCGGACAGATCTGTTCTTTCAAAATTTTTACAAACCCATCCTGCAGACTATTCAACTAAAAAGTTGCAGGAAATGGTTCGCCTGATGAGGGAAAAACGCTACCCTGCTGCATTCAAGTGTTATCATAACTTCCACAAAGTTGATGCCATATCAAGTGACAATCTTTTCTACAAAATGGTCATTCATGTACACAGTGATTCTACTTTTCGGCGATACCAAAAAGAGATGAGGCATAGACCAGGGTTATGGCCACTATATCGAGGATTTTTTGTTGATATCAATTTATTCAAGGCAAACAAGGATAAAGCTGCTGAAATTTCTAAGAACAACAGTATAGATGAAAGTGGTAGCACCAGCTCTGAGAAAGATGAGTTTGCTGATGAAGATGCAAATTTAATGGTCAAATTGAAATTTCTTACATATAAGTTGCGAACTTTTCTCATTCGAAATGGCTTGCCAATTCTGTTTAAAGAAGGTCCTGGTGCTTACAAGGCTTATTACCTGAGACAAATGAAAATATGGGGAACGTCTCCAGCAAAGCAGAGAGAACTTAGCAAAATGCTTGATGAATGGGCTGTGTATATAAAAAGGAAGTGTGGAAATAGGCAATTGTCATCATCAATATATCTTAGTGAAGCTGAACCTTTCCTTGAACAGTACGCAAAACGTAGTCCACAGAACCAAGCCCTAATAGGTTCTGCCGGTAGTTTAGTTAGGACTGAAGATTTCTTGGCTATTGTTGAGGGAGGGCAGGATGAAGAAGGTGATCTTGTGGCTGAGCGGGATATAGCACCATCAGGGCCTAATATCTCAGTCAAAGACACAGTTCCAAAAGATGAAGGGTTGATTGTATTCTTTCCTGGCATACCCGGTTGTGCTAAGTCTGCCCTTTGCAAAGAATTGCTAAATGCCCCAGGAGGACTAGGAGATGATCGACCAGTTCATAGTCTCATGGGTGATCTAATCAAAGGAAAATATTGGCAGAAAGTGGCTGAAGAGTGCAGGAGGAAACCAAAGTCTATAATGCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAGACTGATTGAAGACATGTGTCACAGAACCAGGGCATCTGCTGTACCAGTTGTGCCTGAATCTGAAGGAACTGATTCAAATCCATTTTCCCTGGATGCATTAGCTGTTTTCATGTTCCGTGTGCTTCAACGAGTCAATCATCCGGGAAATCTCGACAAGGCATCTCCAAATGCTGGCTATGTGCTGCTAATGTTTTATCACCTTTATGACGGCAAGAGCCGAAAAGAGTTTGAGGGTGAATTAATTGAGCGTTTTGGGTCACTTGTCAAGATGCCATTATTAAAATCCGATAGGAATCCCCTTCCTGAGGCAGTGCAGTGCATTTTGGAGGAAGGAATTGATCTATATAAGCTTCACACCAAACGACATGGAAGATTAGAGTCTACCAAGGGATCGTACGCAAAGGAATGGATAAAATGGGAGAAACAATTACGGGACATTCTTTGTGAAAATGCTGAGTATTTTAATTCAATTCAGGTTCCTTTCGAGTTTGCTGTCAAGCAAGTACTGGAACAATTGAGAAACATTGCTAAGGGAGATTACACAACACCAGATACTGAAAAGAGGAAATTTGGTAGCATTGTTTTTGCTGCTCTCAGTCTGCCAGTTACAGAAATTCAAGGCGTCCTTAATAATTTGGCCGAGAATAATCCCAAGATTGAGGCATTCCTTAAAGACAAGCAGTTAGGGAATCTTAATCGAGCTCATTTGACTCTTGCCCACAAGAGAAGTCATGGCATCAAAGCTGTAGCTGATTATGGTCTCTTTCTGCATAAGAAGGTACCCGTGGAGTTGATGGCACTGCTCTTCTCAGATAAAATGGCTGCATTTGAGGCTTGTCCCGGCTCAGTGGAAGGAGAGAAGATAGTCTCAAAAAATGCATGGCCCCATGTTACCTTGTGGACTAGTGAAGGGGTTGCAGCCAAGGAGGCCAACATGTTACCACAGTTGCTTACAGAGGGGAAAGCAAATCGGATTGACTTCAATCCTCCCATCAATATATCTGCCACCGTCGAATTTTATTGA 3483 0.4223 MSAPQRLLCTLSHHTLPLPSPSLSRTSLFLPFAHQYWTITPSTMPRNQPSEQRWKEKPKNEDQLSATGDAAATAAETVTNKLAGMHIGDSSDVQHGIKGTVQGSTAIWKPKSYGTASGGATATEVDGRKVDADMASTQKNSSSSTGLSKLFRGNLLENFTVDNSTYSHAQIRATFYPKFENEKSDQEVRTRIIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLERNNMCISMELVTAVLGDHGQRPNEDYVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFAAYDALCEEGTATPVCKALDEIADVSVLGSKDHVKAQGEILEGLVARLVSHESSNHIEKVLKEFPPPPADGVALDFGPSLREICAANRSDEKQQIKALLESVGSSFCPDYSDWFGLDASDSHSRNADRSVLSKFLQTHPADYSTKKLQEMVRLMREKRYPAAFKCYHNFHKVDAISSDNLFYKMVIHVHSDSTFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKDKAAEISKNNSIDESGSTSSEKDEFADEDANLMVKLKFLTYKLRTFLIRNGLPILFKEGPGAYKAYYLRQMKIWGTSPAKQRELSKMLDEWAVYIKRKCGNRQLSSSIYLSEAEPFLEQYAKRSPQNQALIGSAGSLVRTEDFLAIVEGGQDEEGDLVAERDIAPSGPNISVKDTVPKDEGLIVFFPGIPGCAKSALCKELLNAPGGLGDDRPVHSLMGDLIKGKYWQKVAEECRRKPKSIMLADKNAPNEEVWRLIEDMCHRTRASAVPVVPESEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYDGKSRKEFEGELIERFGSLVKMPLLKSDRNPLPEAVQCILEEGIDLYKLHTKRHGRLESTKGSYAKEWIKWEKQLRDILCENAEYFNSIQVPFEFAVKQVLEQLRNIAKGDYTTPDTEKRKFGSIVFAALSLPVTEIQGVLNNLAENNPKIEAFLKDKQLGNLNRAHLTLAHKRSHGIKAVADYGLFLHKKVPVELMALLFSDKMAAFEACPGSVEGEKIVSKNAWPHVTLWTSEGVAAKEANMLPQLLTEGKANRIDFNPPINISATVEFY* 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00902 1160 PANTHER TRNA LIGASE 1 101 1160 IPR038837 GO:0003972|GO:0006388
Rops3g00902 1160 MobiDBLite consensus disorder prediction 41 69 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00902 - - gmx:100815563 1974.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00902 3 11546481 11577869 Rops3g00902 3 11546481 11577869 ECH