Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00901 ATGAATTGGGGTGAGTGGGTGAGGATGAAGGAGTGTTTGAGGGAGTTCATGATTGGGGTGGCGGAGATGACGGTGGAGTTTGGAAAAGGGTGTAGGGACATAGTGAAACAGAGCTTGGTCAATGAAGATTCCTATATTGTTAGGAACTTGGGAAGGGATTCCTATGTTGGGAAGAGAGTGAGAGGACCCTGTGCTAAATTGTTCAACAAATTGAGTTTCTTCAATGAGTACTTGCCTGAAGATAAGGACCCTCTTCATGCTTGGTCCGTTATACTCTTCGTTTCATTACTTGCCTTCTCAGCTTTATATGCAAATTTTGAGCATGATCCATCAACCCCACCAGTGAAGCAGGTATTTGTACGTCCTCCTAGTGCAAGCCGCATAGTGCTTCCAGATGGAAGATACATGGCATATAAGGAGCGAGGTGTTTCAGCTGACAAAGCTAGATTTTCAATGATTGCTCCGCATATTTTTCTTTCCTCTAGGCTTGCAGGAATTCCTGGAGTTAAAGATTCACTGCTGGAAGAGTTCGGCATTCGGTTGCTGACATATGATCTTCCTGGTTTTGGTGAGAGTGACCCTCATCCCAAGAGAAATCTGGAATCCTCAGCAACAGATATGTCATTTTTAGCGGATGCTCTTGGCGTGGACAAGTTTTGGGTTGTTGGTTACTCAAGTGGAAGCATGCATGCTTGGGCTGCTCTTAGATACATTCCTGATAGAATTGCAGGTGCAGTCATGTTTGCTCCCTTGGTGAACCCATATGATCCTATCATGACAAAGGAAGAGAGACGGAAAACTTGGAACAAATGGACACGAAAAAGAAAATTCATGTACTTCTTAGCTCGTAGGTGTCCTAGACTTCTTGCTTTCTTCTATCAGCGAAGTTTCTTGTCAGGAAAGCATGGTCAAATTGATAGGTGGCTGTCTTTATCTCTGGGAAAGAGGGATAAAGCACTGATGGAAGATCCAATCTATGAGGAATTCTGGCAAAGGGATGTGGAAGAGTCAATCAGGCAAGGAAATGCAAGACCCTTTATGGAGGAAGCCGCTTTGCAGGTCTCAAATTGGGGTTTCAGCCTTTCAGACCTCAAGTTGCAGAAACGAAAAAAGACTAATAATGTGCTAAGTTGGTTTAAGGAATTTTTCGCTGAAACTCAGGAGTATACAGGCTTTCTTGGTCCAATACATATATGGCAAGGAATGGATGATAAAGTGGTTCCACCATCAATGACTGATTTTGTGCACCGTGTACTACCTGGAGCTGCAGTACATAAACTCCCATATGAAGGCCATTTCACCTATATCTACTTTTGTGATGAATGCCACAGACAGATATTCACTACACTTTTCGGAACCCCTCAAGGCCCTCTCAGCATTTCTTTAGAAGTAGATGAAACTGCCTAG 1407 0.435 MNWGEWVRMKECLREFMIGVAEMTVEFGKGCRDIVKQSLVNEDSYIVRNLGRDSYVGKRVRGPCAKLFNKLSFFNEYLPEDKDPLHAWSVILFVSLLAFSALYANFEHDPSTPPVKQVFVRPPSASRIVLPDGRYMAYKERGVSADKARFSMIAPHIFLSSRLAGIPGVKDSLLEEFGIRLLTYDLPGFGESDPHPKRNLESSATDMSFLADALGVDKFWVVGYSSGSMHAWAALRYIPDRIAGAVMFAPLVNPYDPIMTKEERRKTWNKWTRKRKFMYFLARRCPRLLAFFYQRSFLSGKHGQIDRWLSLSLGKRDKALMEDPIYEEFWQRDVEESIRQGNARPFMEEAALQVSNWGFSLSDLKLQKRKKTNNVLSWFKEFFAETQEYTGFLGPIHIWQGMDDKVVPPSMTDFVHRVLPGAAVHKLPYEGHFTYIYFCDECHRQIFTTLFGTPQGPLSISLEVDETA* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00901 468 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 94 452 - -
Rops3g00901 468 SUPERFAMILY alpha/beta-Hydrolases 125 447 IPR029058 -
Rops3g00901 468 Gene3D alpha/beta hydrolase 119 438 IPR029058 -
Rops3g00901 468 Pfam alpha/beta hydrolase fold 169 436 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00901 Rops-Chr3 11540115 11544983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00901 177 257 Acyl Lipid Metabolism Gene Families AT4G02340 34.524 9.98e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00901 - - gmx:100790561 830.861