LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops3g00897	ATGAGAAATAGCAATCACTTGATTGGGTTACTAAACTTCTTAACCTTCTTGCTATCAATTCCAATTTTAGGAGGTGGGATATGGCTAAGTAGCAGAGCAAACAACACAGATTGTCTCATGTTTCTTCAATGGCCCTTGATCATAATAGGTGTGAGCATCATGGTAGTTTCCTTGGCTGGTTTTGCTGGTGCTTGTTACCGCAACACTTTCCTCATGAGACTCTACCTAGTCGCCATGTTTGTGATCATTGTTGTGCTTATTGGGTTCATAATCTTTGCTTATGTTGTCACGGATAAAGGGGGATCAGGGAGAAGGGTGATGAATAGGGCTTACAGTGATTATTACATTGAGGATCATTCAGGGTGGTTGGAGGAACGTGTAGCTAGTAATAGCTATTGGGGTAAGATTAGCTCATGTATTAGGGACTCTAAAGTGTGTTCTAAGATGGGGAGAAACTTTAATGGGATGCCTGAAACTCTTGATATGTTCTCCCGAAGAAAGCTCTCTCCTATTGAGTCTGGTTGCTGCAAGCCCCCAACAGATTGTGGCTATGTGTATCAGAATGAGACGGTATGGAACCTTGGATCAGGGCTAATGGGAGGTATCCCCGATTGCACTAAGTGGAGCAATGACCAACAGCAACTTTGCTTTGCCTGTGATTCTTGCAAGGCTGGTGTGCTAGCTAGTCTCAAGAAGAGTTGGAGGAAAGTCTCAGTGATCAACATTGTTGTTGTGATCATCCTTGTAATTGTTTACATAATTGCTTATACAGCTTATAGGAACAACCGCAAGATGGATAATGATGAATCCTATGGTGAAGCAAGGATGACAAAGTCACATCCTAGTGCCTTCCAACTTTAA	861	0.4239	MRNSNHLIGLLNFLTFLLSIPILGGGIWLSSRANNTDCLMFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVAMFVIIVVLIGFIIFAYVVTDKGGSGRRVMNRAYSDYYIEDHSGWLEERVASNSYWGKISSCIRDSKVCSKMGRNFNGMPETLDMFSRRKLSPIESGCCKPPTDCGYVYQNETVWNLGSGLMGGIPDCTKWSNDQQQLCFACDSCKAGVLASLKKSWRKVSVINIVVVIILVIVYIIAYTAYRNNRKMDNDESYGEARMTKSHPSAFQL*	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops3g00897	286	PANTHER	TETRASPANIN-8-RELATED	1	265	IPR044991	GO:0009734\|GO:0016020
	Rops3g00897	286	Pfam	Tetraspanin family	6	254	IPR018499	GO:0016020
	Rops3g00897	286	PRINTS	Transmembrane four family signature	39	65	-	-
	Rops3g00897	286	PRINTS	Transmembrane four family signature	66	94	-	-
	Rops3g00897	286	PRINTS	Transmembrane four family signature	6	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops3g00897	Rops-Chr3	11476568	11480774	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops3g00897	1	277	Miscellaneous Gene Families	AT5G60220	71.480	4.76e-124	355

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops3g00897	-		-	gmx:100788977	470.314