Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00893 ATGGGGAAATCACAAGCAGATGAGAAGATTCTCAGCTACAATGATGTGGTGCTTAGACGATCGGATCTAGACATCCTTAGTGGTCCATATTTTTTGAATGATCGAATTATTGAGTTTTATTTCAGTTATCTTTCTTCATGCCATCCGTCTCAGGGTATCCTGCTGGTTCCACCATCCATTGCATTTTGGATAATTCAATGTCCTGTCACTGAGGCCCTAAAAGATTTCTTAGAGCCCCTTCATTTGTCTGATAAGACACTGGTTATATTTCCAATCAATGACAATGATGATGTTAACAAAGCTGAAGGTGGATCTCATTGGAGCTTACTTGCATATTACCGCAATGCTAATCTTTTTGTTCACCATGATAGCTGTAGACACATGAATGCAGCACCTGCTAAGCAATTATATAAAGCTGTTGTTGGATACATGGGATTATCTGGATCAGGGTCTGAGGCCAGCTTTCTGGAATGCTCTGATTCACCTAAGCAAGCCAATGGTTATGACTGTGGCTTATATGTCACAGCCATAGCGAGAGTGATATGCAACTGGCATGTAAATGGTAAAAATACTGATGCAAATGATTTGTGGTCTTCGGCTGTGAAAGAACAGGTTACTCCATCTGCTGTTGCCAGCATGCGAAGTGAGGTCCTGGCCTTGATCAGAGATCTAATGGCAAGACATTCAGACCAGCATGCTCCAGAATAA 708 0.4167 MGKSQADEKILSYNDVVLRRSDLDILSGPYFLNDRIIEFYFSYLSSCHPSQGILLVPPSIAFWIIQCPVTEALKDFLEPLHLSDKTLVIFPINDNDDVNKAEGGSHWSLLAYYRNANLFVHHDSCRHMNAAPAKQLYKAVVGYMGLSGSGSEASFLECSDSPKQANGYDCGLYVTAIARVICNWHVNGKNTDANDLWSSAVKEQVTPSAVASMRSEVLALIRDLMARHSDQHAPE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00893 235 PANTHER SENTRIN-SPECIFIC PROTEASE 8 4 227 IPR044613 GO:0019784
Rops3g00893 235 Pfam Ulp1 protease family, C-terminal catalytic domain 74 182 IPR003653 GO:0006508|GO:0008234
Rops3g00893 235 Gene3D Adenoviral Proteinase; Chain A 6 227 - -
Rops3g00893 235 ProSiteProfiles Ubiquitin-like protease family profile. 16 181 IPR003653 GO:0006508|GO:0008234
Rops3g00893 235 FunFam Ulp1 protease family protein 7 227 - -
Rops3g00893 235 SUPERFAMILY Cysteine proteinases 7 225 IPR038765 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00893 K08597 - gmx:100800268 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00893 3 11419696 11422239 Rops3g00893 3 11419696 11422239 ECH