Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00869 ATGACAATGGAACTTCCCATTTTCTTCTTTTTGTTATTCCTTGCATCAACACATGTAGGAGCATCCCCCTCCTCAAGCTCAAGCATATTCCGAGAATACATTGGAGCTGAGTCCAACAATGTCAAATTTTCAGATGTTCCTGTTAACCCTGATGTCCAATTCCACTTCATTCTCTCATTTTCCATAGACTATGATACATCATCTTCCCCTTCTCCCACCAATGGAAAGTTTAACATCTTCTGGGACAATCAAAACCTAAGCCCCTCCCAAGTTTCTTCCATCAAGAGTAAGAATTCAAATGTCAAGGTAGCTCTTAGTCTTGGAGGGGACAGTGTTGGAGGTGGCTATGCTTACTTTAATCCATCTTCAATTGATTCTTGGGTTTCTAATGCAGTTTCTTCACTCACAAACATAATCAAGGAGTATAATTTGGATGGAATAGACATCGATTATGAACATTTCAAGGCAGACCCTGATACCTTTGCTGAGTGTGTGGGGAAGTTAATCAAAACTCTCAAATCAAATGGGGTCATCAAATTTGCTTCTATTGCTCCATTTGATGATGATCAAGTCCAAAGTCACTATTTGGCTTTATGGAAAAGTTATGGGAACCTCATAGATTATGTTAACTTCCAGTTTTATGCATATGACAAAGGAACAAGTGTGTCACAGTTTATTGATTATTTCAACAAACAAAGCTCAAATTACAATGGTGGGAAGGTGTTGGTGAGTTTCATTAGTGATGGGAGTGGTGGGTTGTCCCCAGATGACGGATTCTTCACAGCATGCCATAGGCTAAAGAGTCAGCAAAAGCTTCATGGTATCTTTGTGTGGTCTGCTGATGACTCAATGGCAAATGGTTTTCGTTATGAGAAGCAATCACAAGCCCTTTTGGCTATACCTTAG 906 0.3974 MTMELPIFFFLLFLASTHVGASPSSSSSIFREYIGAESNNVKFSDVPVNPDVQFHFILSFSIDYDTSSSPSPTNGKFNIFWDNQNLSPSQVSSIKSKNSNVKVALSLGGDSVGGGYAYFNPSSIDSWVSNAVSSLTNIIKEYNLDGIDIDYEHFKADPDTFAECVGKLIKTLKSNGVIKFASIAPFDDDQVQSHYLALWKSYGNLIDYVNFQFYAYDKGTSVSQFIDYFNKQSSNYNGGKVLVSFISDGSGGLSPDDGFFTACHRLKSQQKLHGIFVWSADDSMANGFRYEKQSQALLAIP* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00869 301 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 295 IPR001223 GO:0005975
Rops3g00869 301 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 144 152 IPR001579 GO:0004553|GO:0005975
Rops3g00869 301 CDD GH18_narbonin 29 283 - -
Rops3g00869 301 SUPERFAMILY (Trans)glycosidases 27 293 IPR017853 -
Rops3g00869 301 Gene3D Glycosidases 27 300 - -
Rops3g00869 301 PRINTS 2-S globulin family signature 74 89 IPR000677 -
Rops3g00869 301 PRINTS 2-S globulin family signature 91 109 IPR000677 -
Rops3g00869 301 PRINTS 2-S globulin family signature 27 40 IPR000677 -
Rops3g00869 301 PRINTS 2-S globulin family signature 261 280 IPR000677 -
Rops3g00869 301 Pfam Glycosyl hydrolases family 18 78 218 IPR001223 GO:0005975
Rops3g00869 301 PANTHER CHITINASE 2-LIKE 14 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00869 Rops-Chr3 10825994 10826899 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00869 - - aprc:113859773 519.62