Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00859 ATGGACGATGAATTGCTTGAACTTCAGCGACAATTCGAGTTCGCACAACAAGCAAAGTCCAGCATTCGATTATCGGAACGAAACGTCGTCGAATTGATCCAAAAATTACAACATCTCAAAATCATCGATTTCGAGCTTCTCCACACTGCTTCTGGCAAAGAATACATCACTCTCGATCAACTGAAGAATGAGATGGTGAATGAGGTGAAGAAATTAGGGCGTGTTTCTGTGATTGATCTTGCTGATACTACTGGAGTTGACTTGTACTATGTGGAGAAACTGGTTCAGAACATTGTGACAGATCACCGAGAATTGATGTTGACTCAAGGTGAAATAATTTCGGAATCTTATTGGGACTCAATTGCCGAAGAGATTAATGAGAGGCTTCAAGAATGTTGCCAAATTGCACTGACAGAAATTGCTGCGCAATTGAATGTTGGTTTGGACTTGGTTGCCTCTGTGTTGGAGCAGCGCATTGGCACTATTGTGAAAGGAAGGCTTGAAGGGGGGCAGCTGTATACTCCTGCCTATGTGGATCGTGTTAGTGCCATGGTTCGAGGTGCTGCACGGGGCATCACGGTTCCGACGAATTTGACAGTGTTATGGAGCTCCTTACAGCAGTTACTGCAAGAAATGGATGGAGCCAGCGGTGTGGCCGTTGATGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGGAGGCAAGATTTCAGGGTCCCTTCGTGCTGGAGTACATTGGACCCCAGCTGTATTTGCCATTGCTCAAAAGGAATCTGTGGATTCATTCTTTTCACAGAATTCTTTTATCAGCTATGAGGTTCTGCACAAACTGGGAATTCCCCAGCCCATTCACTTCTTGCAGTCCAGATATCCTGAAGGCAAACCTCTCGTTTCAACATTTGTTCACCCATCCATGATTGAGATGCTAGATGCTGCTACTGAGGATGCTATTGAGCATGGTAGCTGGAGTGATTCTCTTTCCTTATTGCCCTCGTCTTTTACACCTCAAGATGTATCTAAAATGTTGTCCCTCTGTCAATCTGTTCAATTTGCTCTTAAGTCTAGCAAAGCACACATTTTTGGGGATTTTTATGTGTTGAGCAGCAGCTTTATGAAGGACATCTGTGATCGCCTGGTCAAAGAATTGGAGACATTAGGTGTCTCAGGGTCTTCTGGCACTGTGATACCTGGTGATTTACAAGTAGCCAATGAAACAAAAGTAGGGTATGATTCAAACAGGTTGAATGAGTCTAATGAAATGGCGAGTGATGGTGGTGCCAATAGGCATGCTGATAAAGGGTCAAAGAAGAAAAGGGGGAAAGGCACAGGAAATGCAGTAGCAAATCTATCTGAAAGTGGTCCAGATAACCAGGAACAGACTTCAACAAAATCTAAGAAAAGCCAGAGAAGGGGTAAGGATGCATCTTCACAAATGTCAGATTCAAAGCCAGGCTCGAGGAAAGAATCACTTAAAATGAAAGAGGATAATCTCAGTAGTCCCTCAGAAGAATGGATCATGCAGAAGATTTCAACCTTGATTCCTGATTTTGAAGAACAAGGTGTCGATGATCCTGAAACAATTCTGAGGCCTTTGGCTAACCAATTAAGGCCTACAGTAATCAGTTCTTGGATGGAGAAAAAGAAGGCATTGCTTGCAGACAATGCAGAAAGAATGAAACATGTGCTTGATAATTTGCAGAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGACCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTACGGACAGTAGCAGCTCCTATGGTTGATAGGCTTATTCATAACCTGGATGTGCACAACAAATTAAAGAATGGACTTGACGTGCAGGAAGCTCCAAATTCTGAATCTGTCTCATTTAGTCCTGGAGACAGAGCTGCAATTTCCAAGAGCTTTCCAGGAGCTCTTGCAAATAAGGCTCTTGCAGTTGTAGAAGCATTGGAAGGAAAGAGGGTGGAAATATTCATGGATGCCTTTAGAATGGTAACAGAAGAAAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAGAGAACACTTTTACATTCATATCGCAAGGAATTGACATCTCAAGTTTCTGCTGAGACTGACCTGGTATCACTTCTGCCAAAAGTTGTGTCTTTACTTTATATCCAGGTTCACCACAAAGCTCTTCAAGCCCCAGGAAGGGCCATTTCTGTTGCCATTTCCCGATTGAAGGACAAGTTAGAAGAGTCAGCATACAAGATTTTAACGGATTATCAAACTGCTACTGTGACTCTATTGGCACTATTATCAGCTGCACCTGATGATGAAGAGAGTTGTGCATCTGATAGAATTTTGAGTAAAAGGGAGCTTCTGGAGAGCCAAATGCTGAACCTCAAAAGCTTGGTTTTGAGCACGTCACAGTCTTCATGA 2463 0.4251 MDDELLELQRQFEFAQQAKSSIRLSERNVVELIQKLQHLKIIDFELLHTASGKEYITLDQLKNEMVNEVKKLGRVSVIDLADTTGVDLYYVEKLVQNIVTDHRELMLTQGEIISESYWDSIAEEINERLQECCQIALTEIAAQLNVGLDLVASVLEQRIGTIVKGRLEGGQLYTPAYVDRVSAMVRGAARGITVPTNLTVLWSSLQQLLQEMDGASGVAVDGSFFQSLFNGLVKGGKISGSLRAGVHWTPAVFAIAQKESVDSFFSQNSFISYEVLHKLGIPQPIHFLQSRYPEGKPLVSTFVHPSMIEMLDAATEDAIEHGSWSDSLSLLPSSFTPQDVSKMLSLCQSVQFALKSSKAHIFGDFYVLSSSFMKDICDRLVKELETLGVSGSSGTVIPGDLQVANETKVGYDSNRLNESNEMASDGGANRHADKGSKKKRGKGTGNAVANLSESGPDNQEQTSTKSKKSQRRGKDASSQMSDSKPGSRKESLKMKEDNLSSPSEEWIMQKISTLIPDFEEQGVDDPETILRPLANQLRPTVISSWMEKKKALLADNAERMKHVLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDRLIHNLDVHNKLKNGLDVQEAPNSESVSFSPGDRAAISKSFPGALANKALAVVEALEGKRVEIFMDAFRMVTEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDLVSLLPKVVSLLYIQVHHKALQAPGRAISVAISRLKDKLEESAYKILTDYQTATVTLLALLSAAPDDEESCASDRILSKRELLESQMLNLKSLVLSTSQSS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00859 820 MobiDBLite consensus disorder prediction 447 463 - -
Rops3g00859 820 MobiDBLite consensus disorder prediction 486 500 - -
Rops3g00859 820 MobiDBLite consensus disorder prediction 408 503 - -
Rops3g00859 820 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 819 IPR018611 GO:0061666|GO:0071569
Rops3g00859 820 MobiDBLite consensus disorder prediction 408 424 - -
Rops3g00859 820 Pfam E3 UFM1-protein ligase 1 4 287 IPR018611 GO:0061666|GO:0071569
Rops3g00859 820 MobiDBLite consensus disorder prediction 464 478 - -
Rops3g00859 820 Coils Coil 550 584 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00859 1 783 EF-hand Containing Proteins AT3G46220 61.529 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00859 K22755 - gmx:100808087 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00859 3 10609032 10617647 Rops3g00859 3 10609032 10617647 ECH