Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00838 ATGGCGGAAACAACCTCGTCTTTTCTTTATTCTCCAAGCCATTGGAATTGGAGACACGACAAGTTATGTAAAGGCACATTTGCTGTCACCGGAATCATGCTTACCCTCGTTACTTATGGCGTCTTGCAGTCACTCTTTCTTGTTTTCTGCAACCGCCTCACAACTTCAGCTGTTTCTGCAGCTTCTTTACTGGCAAGTAAAAAAGCATTGGATCCTGTAGCTCCCATTTATAAGTATTGTCTTGTGTCAGTATCGAACATACTGACCACAACTTGTCAGTATGAGGCCCTCAAATTTGTCAGTTTCCCTGTTCAAACTATTGCAAAATGCGCTAAAATGATACCAGTTATGGTCTGGGGCACTCTCATAATGCAGAAGAGATATCAGGGAACAGATTATTTGTTGGCCTTTTCAGTAACTCTTGGCTGCTCAGTATTCATCCTATATCCGGCAGGAACCGACATAAGTCCATATGGTAGGGGAAGGGAAAATACTGTTTGGGGCATTCTCCTAATGATTGGTTATCTAGGGTGTGACGGCTTTACAAGCACATTCCAAGATAAGTTGTTTAAAGGCTATGACATGGGGATACATAATCAGATATTCTACACTACTTTGTGTTCTTGTATTCTTAGCCTGACTGGTCTTATCTTACAAGGACATTTATTCCCTGCAGTAGAGTTTGTTTATCGCCATAATGATTGTTTAGTTGACATAGTGTTGCTTTCGACTGTTGCAACAGCTGGTCAATTTTTCATTTCCTACACAATTCGCACTTTTGGTGCTCTAACATTTGCTACCATAATGACAACGAGACAGTTGGTGAGCATTATGCTGTCATGTGTGTGGTTTGCTCGTCCTCTTATCTGGGAACAGTGGATTGGAACGGTAATTGTCTTTGGCACCATTTATGTAAAAAGCTTTTTGAGGAAAACACCTGAAAAGACAACCTCCTCTGTAGAACTTGTACAAAATGGAACTTCAAATGATTTGAAGGAGAACCAATGA 1008 0.4077 MAETTSSFLYSPSHWNWRHDKLCKGTFAVTGIMLTLVTYGVLQSLFLVFCNRLTTSAVSAASLLASKKALDPVAPIYKYCLVSVSNILTTTCQYEALKFVSFPVQTIAKCAKMIPVMVWGTLIMQKRYQGTDYLLAFSVTLGCSVFILYPAGTDISPYGRGRENTVWGILLMIGYLGCDGFTSTFQDKLFKGYDMGIHNQIFYTTLCSCILSLTGLILQGHLFPAVEFVYRHNDCLVDIVLLSTVATAGQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFARPLIWEQWIGTVIVFGTIYVKSFLRKTPEKTTSSVELVQNGTSNDLKENQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00838 335 Pfam UAA transporter family 36 307 IPR013657 GO:0055085
Rops3g00838 335 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 21 311 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00838 Rops-Chr3 10231552 10236793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00838 18 324 Organic Solute Cotransporters AT5G59740 73.926 1.72e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00838 K15276 - gmx:100782423 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00744 7 10047807 10057113 Rops3g00838 3 10231552 10236793 PCT