Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00831 ATGTCCAGTTCCAGGGGAAGAATAGCGACGGAGCTCCAAATCCCAAAGAAATGGACAGACAGAGAAACCAGACCAGAGAGAACCAAAGTTTGGACCGAGCCCAAGCCCAAAACTCCCAGAAAAGTCTCCGTCGTTTACTACCTTTCCCGAAACGGCCAACTCGAACACCCTCATTTCATGGAAGTTCCTCTCTCTGCACCTCACGGTCTCTACCTCAAAGATGTAATTAATCGCTTGAACATGCTTCGAGGGAAAGGCATGGCTACAATGTACTCATGGTCTGCTAAACGGAGCTACAAAAACGGCTTCGTTTGGCACGATTTGTCAGAGAACGATTTCATTTGTCCAACGCAGGGACAAGATTACGTTCTCAAAGGATCGGAGATTCTCGAACACGCTACCATTACCACCACCACCGCAAGGCCTTCTGAGACGCCAAAATCGGAGGAAGAATCAGATTTTCCGGTGGTGAAGTCACGGCGGCGGAACCAGTCGTGGAGCTCGATAGACTTAAACGAGTACCGAGTTTACAAGTCCGAATCGTTCGGTGACTCGGCCGGAAAAATCGCTGCCGACGCGTCGACTCAGACGGACGACAAACGGAGGAGGAGGAGAACCGTGAGAGAAGAAAAAGAAGAAGAGAAAAATGGAATTGAAAATGAAGAAACGGAGATAGAGGAAGAGAGGGTCCCGCACGTGACTTGTCATAATAATCAAAGTACGGAACTGAGTAGGGAAGAGATCTCTCCTCCACCGTCGGATTCGAGCCCTGAGACGTTAGGGACTCTGATGAAGGTTGATGGACGGTTAGGATTGCGTTCTTCGGTACCCGCGAAGGAGAATATTGAGAGCGGGCCCAGTGGGAGGATGAGAGCTTCCTCGGTTCTGTTACAATTGTTATCGTGCGGTGCGGTGTCCTTCAAGGAGAGTGGGGCCAAAGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCAAGGTTGCCCCGCGGAGCAGGGAATCAAAAGGAGGTAGGGACATCAATGGAAATTCCGGATTTGAGCAGGGTAAGATTGGAAGATAAGGAGTATTTTAGTGGAAGTTTAATCGAAACCAAAAAAGTTGAAGCCCCTGCCTTGAAAAGATCGTCTTCTTACAATGCGGATAGTGGTTCCCGGTTGGAAATCACCGAGCATGAAGAGGAAGTCGTGAGGGCAAAGTGCATACCGCGTAAGTCCAAAACATTATCAACAAAGAAAGAAGAGGGTACTTCCATGGATATTGGAAGCAGTAGTAAACATGGGAGCAAAAGATTTGACGTATAA 1302 0.4854 MSSSRGRIATELQIPKKWTDRETRPERTKVWTEPKPKTPRKVSVVYYLSRNGQLEHPHFMEVPLSAPHGLYLKDVINRLNMLRGKGMATMYSWSAKRSYKNGFVWHDLSENDFICPTQGQDYVLKGSEILEHATITTTTARPSETPKSEEESDFPVVKSRRRNQSWSSIDLNEYRVYKSESFGDSAGKIAADASTQTDDKRRRRRTVREEKEEEKNGIENEETEIEEERVPHVTCHNNQSTELSREEISPPPSDSSPETLGTLMKVDGRLGLRSSVPAKENIESGPSGRMRASSVLLQLLSCGAVSFKESGAKDQGFSLVGHYKSRLPRGAGNQKEVGTSMEIPDLSRVRLEDKEYFSGSLIETKKVEAPALKRSSSYNADSGSRLEITEHEEEVVRAKCIPRKSKTLSTKKEEGTSMDIGSSSKHGSKRFDV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00831 433 MobiDBLite consensus disorder prediction 144 158 - -
Rops3g00831 433 MobiDBLite consensus disorder prediction 234 260 - -
Rops3g00831 433 Coils Coil 204 228 - -
Rops3g00831 433 MobiDBLite consensus disorder prediction 194 215 - -
Rops3g00831 433 PIRSF UCP031043 10 426 IPR021182 -
Rops3g00831 433 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 23 424 IPR010369 -
Rops3g00831 433 MobiDBLite consensus disorder prediction 400 433 - -
Rops3g00831 433 MobiDBLite consensus disorder prediction 188 264 - -
Rops3g00831 433 MobiDBLite consensus disorder prediction 14 35 - -
Rops3g00831 433 MobiDBLite consensus disorder prediction 136 159 - -
Rops3g00831 433 MobiDBLite consensus disorder prediction 1 35 - -
Rops3g00831 433 Pfam Protein SOSEKI, plant 42 382 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00831 Rops-Chr3 10148951 10153087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00831 - - gmx:100803283 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00831 3 10148951 10153087 Rops3g00831 3 10148951 10153087 ECH