Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00826 ATGGCACCTAAGGCAGCAGAGAAGAAGCCCGCGGAGAAGAAACCCGCCGAGGAGAAGAAGTCCACGGTGGCGGAGAAGGCACCACCGGCTGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCAAAGGAAGGTGGTGCTGCCGCCGGAGACAAGAAAAAGAAGAGAAACAAGAAGAGTGTTGAAACTTACAAGATCTACATCTTCAAGGTGTTGAAGCAGGTTCACCCAGACATTGGAATTTCCAGCAAGGCCATGGGTATCATGAACAGCTTCATCAACGATATCTTCGAGAAGCTTGCTCAGGAATCTTCTAGACTCGCTCGTTACAACAAGAAGCCCACGATTACTTCAAGGGAGATTCAGACTGCGGTTAGGCTTGTCTTGCCTGGAGAATTGGCCAAGCATGCCGTTTCGGAGGGAACAAAGGCTGTGACTAAGTTCACAAGTTCTTGA 453 0.5011 MAPKAAEKKPAEKKPAEEKKSTVAEKAPPAEKKPKAGKKLPKEGGAAAGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00826 150 Gene3D Histone, subunit A 22 150 IPR009072 GO:0046982
Rops3g00826 150 PRINTS Histone H2B signature 82 102 IPR000558 GO:0000786|GO:0003677|GO:0030527
Rops3g00826 150 PRINTS Histone H2B signature 104 121 IPR000558 GO:0000786|GO:0003677|GO:0030527
Rops3g00826 150 PRINTS Histone H2B signature 121 134 IPR000558 GO:0000786|GO:0003677|GO:0030527
Rops3g00826 150 PRINTS Histone H2B signature 63 81 IPR000558 GO:0000786|GO:0003677|GO:0030527
Rops3g00826 150 PRINTS Histone H2B signature 134 147 IPR000558 GO:0000786|GO:0003677|GO:0030527
Rops3g00826 150 MobiDBLite consensus disorder prediction 1 58 - -
Rops3g00826 150 SUPERFAMILY Histone-fold 34 150 IPR009072 GO:0046982
Rops3g00826 150 SMART h2b3 53 149 IPR000558 GO:0000786|GO:0003677|GO:0030527
Rops3g00826 150 FunFam Histone H2B 17 150 - -
Rops3g00826 150 PANTHER HISTONE H2B 11 149 IPR000558 GO:0000786|GO:0003677|GO:0030527
Rops3g00826 150 ProSitePatterns Histone H2B signature. 118 140 IPR000558 GO:0000786|GO:0003677|GO:0030527
Rops3g00826 150 Pfam Core histone H2A/H2B/H3/H4 5 126 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00826 Rops-Chr3 10112834 10113600 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00826 K11252 - jre:109002626 221.861