Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00823 ATGGCAGAAAATTCTTCTAACGGAGATCACACAGCTCCAACAAAGCAACCTCCCTTGCCATCTCCCTTGCGATTCTCCAAATTCTTTCAGTCTAACATGAGAATCTTGGTTACCGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTTATTGTCGTTGATAACTACTTCACTGGATCAAAAGACAACCTCAACAACTGGATTGGTCACCCAAGATTTGAGCTGATCCGTCATGATGTCACTGAGCCTTTGAGGATCGAGGTTGATCAGATCTACCATCTTGCATGTCCCGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACTATAAAGACAAACGTGATTGGCACAATGAACATGCTTGGCCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTGTATGGGGATCCTCTTGTGCATCCCCAACCTGAAAGCTACTGGGGCAATGTCAACCCTATTGGAGTGCGTAGCTGCTATGATGAGGGGAAGCGTGTAGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATACGGGCCGCGCATGAATATTGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCACTTCGTGGTGAATCCTTGACGGTCCAATCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTTGATGGTCTTATCCGTCTCATGGAAGGATCGGACACTGGACCAATCAATCTTGGAAACCCAGGTGAATTTACAATGCTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAAGATAGTGGATAACACTCCTGATGATCCGAGACAGAGAAAACCAGACATTACAAAAGCAAAGGAATTGCTTGGCTGGGAACCAAAGGTCAAGCTGAGGGATGGCCTTCCTCTTATGGAAGAAGATTTCCGTTTGAGGCTTGGAGTTGACAAAAAAAATTAA 1041 0.4352 MAENSSNGDHTAPTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNYFTGSKDNLNNWIGHPRFELIRHDVTEPLRIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTMNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGLIRLMEGSDTGPINLGNPGEFTMLELAETVKELINPNVEIKIVDNTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVDKKN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00823 346 MobiDBLite consensus disorder prediction 1 21 - -
Rops3g00823 346 FunFam UDP-glucuronic acid decarboxylase 6 32 341 - -
Rops3g00823 346 CDD UGD_SDR_e 33 337 - -
Rops3g00823 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 21 341 IPR044516 GO:0042732|GO:0048040|GO:0070403
Rops3g00823 346 Gene3D - 32 339 - -
Rops3g00823 346 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
Rops3g00823 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00823 Rops-Chr3 10084923 10089871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00823 30 345 Miscellaneous Gene Families AT1G02000 23.647 5.24e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00823 K08678 - qsu:112026144 661.759