Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00822 ATGTGCAAACTATCATCATTTTGCTTGAACCAAGCATGCTTAGCTTCTGCATTTCGAACAGTCCTAGCTTGCACCATAGTGGGTTGTGTCACCCTTTATGGTCCTACCTCCTTTAACGAACTAATACCCTTCCCAGCATTATCGTACGTAACCGTGATTCTCATTATCAAAGATGCCACTTTGGGAGAGACTTTGCATGGTTGCTGGCTCGCACTCTATGCTACCATTCAGAGCATGGGTCCCGCCATGTTGAGCTTTTGGTACATTGGACCTGGAAGATTCTCGAAGGTCACGACGGCTCTGGCGGTGGCTCTGGCGGCATTTGTGGTGGTGCTGCCGGCGGAGTCAACACATTTGATAGCTAAACGAATAGCATTGGGTCAGATAGTGGTGGTTTATGTCATTGGTTATATTAAAGACATTGAAAATGAAGCTCTCATGCTACCTTTTCAAGTGGCAGCTAGCACTGCCCTTGGACCCTTGGCTTGTGTTCTTGCATTATTGCTTCCTTGCCCACGTCTTGCATGTCATCAGGTGAAAAAGAATTACAAGCTACTAACACATAATACCTTAAAAAGGCTTAAGCTTTTGATGAAGGCCATATGTGAACAGGACAATACTTTGGCACTCACTTCAATCTCTCATGCCAAGTCTCTGGCAACTGAACGAACCAAGCTCCTCCAAATCATCACCCGTTACCAAAATGGCATGAGTTGGGAGAGACCTCCAATAAAATATTTTAGATCCTATTGCTTGAACCCGGGAAAGAGACTTCAAGAAATAGATGCCACCTTGAGAGGGATGGAATTGGCTCTAAGGAGCATCAATTCATTCCCAATCAGCATAATTGATGAAGATATGAAACATGGTCTAATTTGGCTAGAGCAGCATGTTAGCCTTACCTTGAAAGAAACTATGTACAATTTATATGGTGGTTCAATAACTGTTCCTGAACTCAGTGCAAAAAGCATAACCAATTTTCTCCAATCCCTTCACACAATTCCAACAACCCACCAAGATTTACCCCTTTATTTCTACTTATTTTGCGTCAAACTCCTCCACAATAACTCATTGGCCGAATCTCCAACTAGCATTCAAGACCAGCCTAGTCCTACTGAGAAAAATGGAAATTCTCTAGAGGATAAAAAGTGGGCTAATTGGGTGACAATGTTAAGAAGCCCAAAACTTATGCAATCATTCAAGTGCTCTCTCTCACTGGGTCTTGCAGCATTGTTGGGCTTATTATATAGCAAAGAGAATGGGCTTTGGTCTGCACTCCCTGTGGCAGTAACATTTGCTTCAGGTAGGGAACCCACATTTAGAGTTGCAAATTTAAAAGCCCAAGGGACTGTATTAGGAAGTGTTTATGGAGTGTTGTGTTGCTTTGTCTTTGAAAGATTCTTGCCATTAAGATTCTTGTCCCTTCTTCCATGGATCATTTTCACAAGTGTCCTTCAGCAAAGTCGAATGTATGGCCCAGCTGGTGGGATTTCTGCACAGATTGGGGCCATTCTAATACTGGGTAGGAAAAATTTTGGCCCACCCACTGAGTTTGCTATTGCAAGAATCGTGGAAACCTTCATTGGGCTAACTTGTTATGTTTTTGTGCATCTTCTCTTCATGCCCAAAAGAGCTTCTACATGTGCAAAAGTTGAGCTTTCTACGAGTTTGGCCACACTTGATGAGTCCATTCGTTCCTTTAGCCTATCCACTAAAACTGACTTGGAAGAAAACCATAAGAAGCTGAAGATGCAAATTAACGAGCTAAGGAAATTTGTTGTAGAAGCTGAAGTGGAGCCCAATTTTTGGTTCTTACCTTTTCATGGTGCTTCCTATAATAAGCTTATGGGGTCGTTTTCCAAATTGGCTGACATATTGCACCTTGGAACACATGCTTTGAAGTTCCTAAAACAAGAATTCCAAAGAAGTGGGGCCTGTTGGAAAGAGCATGTGAGTGTGCTAGAAGGTGACATTGGACACTTGAAGGAACTAGTTTGCTCCTCAATAAAAAGTTTCGAGGAGATTTCTAGGATTAAATCACTAACCTTTCTTGAGAAGGAGCTTGAGAAGAGAAACATCACTTGTGATCTCGAAGTGGGAAGGTCAACAAAGTCTAGAATCTGCATGGTTTCTGGTTTAGGCCAAAATGAAGTTGAAGAGACCATAGGCTCTTATCTCCAAGAGTCAAGAAATATTGTTGATAACTTGTATGGTGCTGAAGGTGAACAGGAGCTGAAGAGCCATGTTGTTCTGTGTTTGAGCGCTCTGGGGTTTTGCTTGAGTGCACTTGTGAGAGAGACAATAGAAATTGAAGAAGCAATCAAGGAACTTGTTCAATGGGAGAACCCATCTAGTGAGATTGATTTGTACGCGATATCGTAGGCTTTGATAATGGCAACGAATTCTTCTAATGGAGACCATCAACAAGCAGCAAAGCAACCTCCCTTGCCATCACCCTTGCGTTTTTCCAAGTTCTTTCAGTCAAATATGAGAATTCTGGTTACTGGAGGAGCTGGATTCATTGGCTCTCACCTAGTTGACAGGTTGATGGAAAATGCAAAGAATGAGGTAATTGTTGTTGATAACTTCTTCACTGGATCTAAAGACAACCTTAGAAAATGGATTGGTCATCCAAGATTTGAGCTAATTCGTCATGATGTCACGGAGCAATTGCTGATTGAGGTTGATCAAATCTACCATCTTGCATGCCCTGCTTCTCCAATTTTCTACAAATACAATCCTGTAAAGACAATAAAAACAAATGTGATTGGAACACTGAACATGCTTGGGCTTGCTAAGCGTGTGGGAGCAAGGATTTTGCTTACATCTACTTCGGAAGTATATGGGGACCCTCTTGTGCATCCACAACCAGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGGAGTTGTTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGACGGACGTGTTGTCAGCAACTTCATTGCTCAAGCAATTCGTGGTGAACCCTTAACGGTCCAAGTTCCAGGAACTCAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGCCTCATTCGTCTAATGGAAGGGGAAAACACTGGTCCAATCAACATTGGGAACCCAGGTGAGTTTACAATGACTGAACTTGCCGAGAATGTGAAAGAGCTTATTAATCCAGAAGTGGAGATAAAGATGGTTGAGAACACTCCTGATGATCCTCGTCAGAGAAAACCAGACATAACAAAAGCAAAGGAACTACTGGGCTGGGAGCCAAAGGTCAAGTTGCGTGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTCTGAGACTTGGGGTTGCCAAGAAGAACTAA 3432 0.4251 MCKLSSFCLNQACLASAFRTVLACTIVGCVTLYGPTSFNELIPFPALSYVTVILIIKDATLGETLHGCWLALYATIQSMGPAMLSFWYIGPGRFSKVTTALAVALAAFVVVLPAESTHLIAKRIALGQIVVVYVIGYIKDIENEALMLPFQVAASTALGPLACVLALLLPCPRLACHQVKKNYKLLTHNTLKRLKLLMKAICEQDNTLALTSISHAKSLATERTKLLQIITRYQNGMSWERPPIKYFRSYCLNPGKRLQEIDATLRGMELALRSINSFPISIIDEDMKHGLIWLEQHVSLTLKETMYNLYGGSITVPELSAKSITNFLQSLHTIPTTHQDLPLYFYLFCVKLLHNNSLAESPTSIQDQPSPTEKNGNSLEDKKWANWVTMLRSPKLMQSFKCSLSLGLAALLGLLYSKENGLWSALPVAVTFASGREPTFRVANLKAQGTVLGSVYGVLCCFVFERFLPLRFLSLLPWIIFTSVLQQSRMYGPAGGISAQIGAILILGRKNFGPPTEFAIARIVETFIGLTCYVFVHLLFMPKRASTCAKVELSTSLATLDESIRSFSLSTKTDLEENHKKLKMQINELRKFVVEAEVEPNFWFLPFHGASYNKLMGSFSKLADILHLGTHALKFLKQEFQRSGACWKEHVSVLEGDIGHLKELVCSSIKSFEEISRIKSLTFLEKELEKRNITCDLEVGRSTKSRICMVSGLGQNEVEETIGSYLQESRNIVDNLYGAEGEQELKSHVVLCLSALGFCLSALVRETIEIEEAIKELVQWENPSSEIDLYAIS*ALIMATNSSNGDHQQAAKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENAKNEVIVVDNFFTGSKDNLRKWIGHPRFELIRHDVTEQLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPEVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVAKKN* 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00822 1142 CDD UGD_SDR_e 829 1133 - -
Rops3g00822 1142 Pfam GDP-mannose 4,6 dehydratase 832 1126 IPR016040 -
Rops3g00822 1142 Pfam Fusaric acid resistance protein-like 408 536 - -
Rops3g00822 1142 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 824 1133 IPR036291 -
Rops3g00822 1142 Gene3D - 828 1135 - -
Rops3g00822 1142 Coils Coil 572 599 - -
Rops3g00822 1142 FunFam UDP-glucuronic acid decarboxylase 6 828 1137 - -
Rops3g00822 1142 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 803 1137 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00822 Rops-Chr3 10068253 10080324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00822 826 1125 Miscellaneous Gene Families AT1G02000 24.179 1.04e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00822 - - ahf:112787445 997.653