Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00819 ATGGCTCTGTCTCATGCTCCCTCTTCTTCTGTTTCTCTGTTCCTTGTTTTAACCATTACCCTCACCACCCTCTTCATACCCTCACAGGCCCTTATCTTGACACTTGTAAACAACTGCAAATACACCGTTTGGCCGGCGATACAGCCCAACGCCGGCCACCCAGTTCTCGCCGGCGGTGGGTTAGTCCTCCACACATTCACCCATGTCTCCATTCCGGTACCGGACACCCATTGGTCCGGCCGGGTATGGGCCCGAACCGGATGCGCTTACACCGGCGGGAACCAATTTACCTGCGCCAGCGGTGACTGCGGAGGCCGTTTACAGTGCAACGGCGCCGGCGGCTCCCCACCTGCCACGCTGGCGCAGTTCGACGTGCACCACGGTAACGGCGACTTCGCTTCCTACGGCGTTAGCCTCGTCGACGGTTTTAACGTTCCCATGACAGTGACTCCACATGAGGGAAAAGGGGTGTGTCCCGTCGTAGGTTGTCGGAGTGACCTTGTTGCCACGTGTCCTCCGGTTCTGCAGCACCGTGTTCCTGCGGGTCATGGTCCTGTGGTGGCGTGTAAGAGTGGGTGTGAGGCTTTTCACACTGATGAGTTTTGTTGTAGGAACCATTACAATAATCCTCAAATGTGTAAGGCTAATGTTTACTCAAGTTACTTCAAACACTCGTGCCCTGCAACTTTCACCTTTGCACATGATACTCCTTCTCTTATGCACGAGTGTTCTTCCCCGCGTGAGCTCAAGGTTATCTTTTGCCACTGA 768 0.5482 MALSHAPSSSVSLFLVLTITLTTLFIPSQALILTLVNNCKYTVWPAIQPNAGHPVLAGGGLVLHTFTHVSIPVPDTHWSGRVWARTGCAYTGGNQFTCASGDCGGRLQCNGAGGSPPATLAQFDVHHGNGDFASYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRSDLVATCPPVLQHRVPAGHGPVVACKSGCEAFHTDEFCCRNHYNNPQMCKANVYSSYFKHSCPATFTFAHDTPSLMHECSSPRELKVIFCH* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00819 255 PIRSF PR5 1 255 IPR001938 -
Rops3g00819 255 PANTHER OS03G0233200 PROTEIN 20 254 IPR001938 -
Rops3g00819 255 ProSiteProfiles Thaumatin family profile. 30 255 IPR001938 -
Rops3g00819 255 Pfam Thaumatin family 37 254 IPR001938 -
Rops3g00819 255 SUPERFAMILY Osmotin, thaumatin-like protein 32 254 IPR037176 -
Rops3g00819 255 CDD TLP-PA 32 254 - -
Rops3g00819 255 Gene3D Thaumatin 32 254 IPR037176 -
Rops3g00819 255 FunFam Osmotin-like protein 32 254 - -
Rops3g00819 255 PRINTS Pathogenesis-related protein signature 81 92 IPR001938 -
Rops3g00819 255 PRINTS Pathogenesis-related protein signature 94 123 IPR001938 -
Rops3g00819 255 PRINTS Pathogenesis-related protein signature 245 254 IPR001938 -
Rops3g00819 255 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Rops3g00819 255 SMART tha2 33 255 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00819 Rops-Chr3 10031675 10032658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00819 33 254 Receptor kinase-like Gene Family AT5G38280 36.726 2.81e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00819 - - lja:Lj3g3v3188510.1 452.595