Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00793 ATGGGTAGCCCTCCAAAGAAGTATGAAAGTAAGGGCTTTTTTGCCGCCATGTCTTCCGGTTTATCAATGTTCAGCAACGCTATGCACCGATCTGTTAATGGATTTCTTGGATATGAGGGTGTAGAAGTCGTAAATCCAGAGGGAGGTAAAGATGATGCAGAGGAGGAAGCTCAGAGAGGAAGATGGAAACAGGAGGAAAGGGATAGTTACTGGAAGATGATGCAGAAATATATTGGCTCAGATGTAACATCAATGGTGACACTACCAGTTATTATATTTGAACCAATGACTATGATTCAGAAAATTGCCGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATGAATCAGAGGATCCATATATGCAGTTGGTGTATGCAACATCATGGGCTATATCTGTGTACTTTGCTTACCAACGAACCTGGAAGCCCTTTAATCCTATCCTTGGAGAGACTTATGAATTGGTTAACCACGGTGGAATTACATTTCTTGCGGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTGCATATGACGTGACTTCAAAGTTAAAAACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCAGTTGGAAGAACACGTGTGACCCTTAAGAGGGATGGTGTGGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAACAACCTGATATTTGGCCGGACTTGGGTTGATTCACCCGGGGAAATGATAATGACAAATTTGACAACTGGGGACAAAGCTGTACTCTACTTTCAACCATGTGGATGGTTTGGTGCCGGTCGCTATGAAGTGGATGGATATATTTATAATTCTTCCGAGGAGCCTAAAATATTAATGACTGGGAAGTGGAATGAGTCAATGAGTTATCAACCTTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCACCGAATGACAAATTCCAGTATACATATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAGTTGTTGGCATCAGATTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTGTCAAAATCTGGGACAGAAAAGAGCAGATTGGAGGAGATGCAGCGTGCTGAGAAGAGAACCCGGGAGGCAAAAGGGCATAGCTTCACGCCAAGGTGGTTTGATTTAACTGAAGAGGTGACATCAACTCCTTGGGGTGATTTGGAAATCTACCAATATAATGGTAAATACACTCAACATCGGGCTGCTGCAGATAACTCTGGCAGCGTTGATGATGTTGATGTTAAATCAATTGAATTCAATCCATGGCAGTATGGTGACTTGGCCACGGAATGA 1374 0.4279 MGSPPKKYESKGFFAAMSSGLSMFSNAMHRSVNGFLGYEGVEVVNPEGGKDDAEEEAQRGRWKQEERDSYWKMMQKYIGSDVTSMVTLPVIIFEPMTMIQKIAELMEYSYLLDQADESEDPYMQLVYATSWAISVYFAYQRTWKPFNPILGETYELVNHGGITFLAEQVSHHPPMSAGHAENEHFAYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHVADVPPNDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGTEKSRLEEMQRAEKRTREAKGHSFTPRWFDLTEEVTSTPWGDLEIYQYNGKYTQHRAAADNSGSVDDVDVKSIEFNPWQYGDLATE* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00793 457 SUPERFAMILY Oxysterol-binding protein-like 64 439 IPR037239 -
Rops3g00793 457 ProSitePatterns Oxysterol-binding protein family signature. 167 178 IPR018494 -
Rops3g00793 457 Pfam Oxysterol-binding protein 69 427 IPR000648 GO:0008289
Rops3g00793 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 58 427 IPR000648 GO:0008289
Rops3g00793 457 Gene3D - 359 446 - -
Rops3g00793 457 Gene3D - 152 328 - -
Rops3g00793 457 FunFam oxysterol-binding protein-related protein 3C 151 328 - -
Rops3g00793 457 FunFam Oxysterol-binding protein-related protein 3C 359 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00793 Rops-Chr3 9688528 9693960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00793 - - gmx:100810228 876.7