Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00757 ATGTCGGGCGGTTTCTTTCGGGGTACATCTGCGGATCAAGATACTCGATTTTCGAACAAGCAAGCTAAGCTGCTGAAATCGCAGAAGTTTGCACCAGAATTGGAGCATCTGGTGGACATGACAAAGGTGAATATGGAAGTAATGAAACCTTGGATCACCAGAAGGGTTACCGAGCTTCTTGGTTTTGAAGATGAAGTGCTTATTAACTTCATACACGGTCTTCTGGATGGGAAGGAAGTGAATGGGAAGCAAGTTCAAATACAAATTACTGGATTTATGGAAAAAAACACTGGAAAGTTCATGAAAGAGCTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCTCAGCAGTTCTTGAATGCTAAGGAAGAAGAACTCCAGAAGAAGAAGGCTGAAAATGATAGGATAACAAGTGAAATTCAGAGGAAAAGAGATAAGGAAGGTAGAGAGATCATGGAAGAGAGGCTGAAGAAACTGGACGGAGGATTTGATGCGAAGGATAATGATACTGCTTCAGACCCAACTTTGAAGCCTAGGGATTCAGGGCACTATGTTCAGGATAGGAAAGAAACTGACAAGAGGAATGGTGTCAGGGCAAGGAACAGGTTAAATGGGGTTTCTAGGTCCCCACATTCACCTGCTGTTTCCACTTCGCCTCATCGAGGCTCACCTTCTAGGTCAATGAGTAAATCATTTTCAAATTCTCGAAGTTATTCAGGTGGTAGACACAGGTCAAGGAGTATATCCAAGTCTCCAGAGGCTCGAGGGCGCTCCTTTTCTTCTGAAAGGATTCGCCGGTCTTCACGGCGACAATCTATTTCTCCTCGGAGGCATTCACCAAGACGATCTCCTCATAGGAGGCTATCTTATTCAAGGAGAAGATCCAGATCCAGATCCAGCTCAGATTACAAATCACCTTCTCCTAGACGACGTAGAATACATTCTCCATTCCATCGCAGTTCACCTTCTTTTCGTCGACGCAGAACACCCTCTCCTATTAAAAGACGCAGAACACCCTCTCCTATTAAGAGACGCAGAACACCCTCTCCTATTAAAAGACGTAGATCGCCCACTCCTGTGCGCAGACGCAGATCACCCTCTCCTGTGCGCAGACGCATAACACCTCCTATTAGACGTCGAAGGTCACCCTCACCTGTGCGACGAAGATCTCCAGTTATGCGCCATGGGTCACCTTCACTGGTGCGTCGAATACCACCAAACCGTACACGGCATAGATCAGACTCTCCCATGCAGTCCCCTTCCCCCATAAGGCGAAGGTATGATAGTAGAACTCCACGACGCAGGTTTCCATCTCCTTTGCGGGGTAGATCACCTGTTTTTGATATGAAAAGATCGACAAGTACCTCACCTCAGAAGTCTCCTCCTCGAGATGAATGGAGTTCTCAGTCTCCCATACGGCGTGTATCTCCATCTCCAGTTCGGAGAAATTCTCCAAGACACCAAAAAAGTCCTGTGCAGTCTTCAATGGGAAGAGTCAGAATGCAAAAAAGAGGGTCACCTGAGACTCATCGGCCCTCCAGTCCTTTGCGGTCTGTACAGAGAGATAAAAATGGAAAAGCTTCACGCTATGAATCACAAGATTCAATGTCCACACCTGAGAAGTCTCCAATTCGATCAGTATCTCCCCAAGCAAGGAGTGGGACCAGCAGTAAAGATAGAAGTCCACATAAGAGCCCTCAGAGGCAAAGAAGAGAGACATTGACCAATGAAAGAAGCTTGAGTCCTCTAAAGAAGCCAAGAAGCCAGAAACCTAGCCATGACATCCCAGAGACAGGTGAAGGAGAAGAAACATATTATTCAAGGTTTGAATATGAATTGGATAACTTTCTGTTACTTTATTTTGGAGGAATGTAAGTTACTGTTGTAGATTTATTTGATGTTGTTTTTGCTTATTTTTCTCATATTTTTCTCTATCGCTTTGGTAGAGAGAGCAGAGATCTTAAATCAAATTCATCTCAAAAGAAATCAAAATACTCCCCGGTTAGTAAGCGAAAAGGTTCACCTTCAAAATTTCGTGATGAGGATGAGTTTTATCCTGAAAGGGCAGCTGGTCAGATGGCTTCTGAATATCATCATTACGATAACAATGACAGGAGTAAGAAAGGCCATGAGAGTGATAAATATTCTGGCATGGGAGATCAGTCTCCTGCTCAACAGAAGTCACCAATGAACAAAGAATTTTCTTCCAGTGAGAAGCGTCATGAAGCTTATGTTATAGATATTAAAAAATCTGATGACAAGGATCAATCCAAGAGTAGTGGTCGGCACCACAAATCCGATACCACTAAAGATTTAGTTGGAAAAGTTGATCGTGTCAATCGGAGTGCTTCACATGATTCTGTTTCTGAGGATAATGGTAAACATAGAAGGGAGGGAAAGGATAGGAGAAAGCATAAAAGATCTGAGAAAAAAATTGTGTCTTCTGATGAAAATTATAGTTCTGATTCCGAGTTAGAGGACAGGAAAGAGGCCAAGAGGAAGAAAAAGGAGGAGAAGAAGTTGCGCAAGGAGGAGAAGCGACGAAGACGTGAAGAGAAAAGACGCAGAAGGGAAGAACGGCATGCAGAGAAGCTGAAAATGAAGAGTAAAACAGACTATATTTTGGATGACAAGGAAGCTGAACGAATGGATTATCATCAAAGTGATAATGAAGAGACAGTTGATCCAAAGAAGCTTGAGATTGAGCTCCGGAATAAGGCTCTTGAATCACTCAAAGCAAAGAGGGGCATGGATAACTAA 2772 0.4361 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVNMEVMKPWITRRVTELLGFEDEVLINFIHGLLDGKEVNGKQVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLNAKEEELQKKKAENDRITSEIQRKRDKEGREIMEERLKKLDGGFDAKDNDTASDPTLKPRDSGHYVQDRKETDKRNGVRARNRLNGVSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYSGGRHRSRSISKSPEARGRSFSSERIRRSSRRQSISPRRHSPRRSPHRRLSYSRRRSRSRSSSDYKSPSPRRRRIHSPFHRSSPSFRRRRTPSPIKRRRTPSPIKRRRTPSPIKRRRSPTPVRRRRSPSPVRRRITPPIRRRRSPSPVRRRSPVMRHGSPSLVRRIPPNRTRHRSDSPMQSPSPIRRRYDSRTPRRRFPSPLRGRSPVFDMKRSTSTSPQKSPPRDEWSSQSPIRRVSPSPVRRNSPRHQKSPVQSSMGRVRMQKRGSPETHRPSSPLRSVQRDKNGKASRYESQDSMSTPEKSPIRSVSPQARSGTSSKDRSPHKSPQRQRRETLTNERSLSPLKKPRSQKPSHDIPETGEGEETYYSRFEYELDNFLLLYFGGM*VTVVDLFDVVFAYFSHIFLYRFGRESRDLKSNSSQKKSKYSPVSKRKGSPSKFRDEDEFYPERAAGQMASEYHHYDNNDRSKKGHESDKYSGMGDQSPAQQKSPMNKEFSSSEKRHEAYVIDIKKSDDKDQSKSSGRHHKSDTTKDLVGKVDRVNRSASHDSVSEDNGKHRREGKDRRKHKRSEKKIVSSDENYSSDSELEDRKEAKRKKKEEKKLRKEEKRRRREEKRRRREERHAEKLKMKSKTDYILDDKEAERMDYHQSDNEETVDPKKLEIELRNKALESLKAKRGMDN* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00757 922 MobiDBLite consensus disorder prediction 299 313 - -
Rops3g00757 922 Coils Coil 829 871 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 657 901 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 813 841 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 859 901 - -
Rops3g00757 922 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Rops3g00757 922 MobiDBLite consensus disorder prediction 676 690 - -
Rops3g00757 922 SMART pwi_2 40 114 IPR002483 GO:0006397
Rops3g00757 922 MobiDBLite consensus disorder prediction 701 718 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 132 203 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 452 504 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 561 605 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 209 249 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 721 735 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 132 605 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 415 429 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 274 298 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 842 858 - -
Rops3g00757 922 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Rops3g00757 922 MobiDBLite consensus disorder prediction 736 800 - -
Rops3g00757 922 Coils Coil 123 150 - -
Rops3g00757 922 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 660 918 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 534 560 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 250 273 - -
Rops3g00757 922 MobiDBLite consensus disorder prediction 314 392 - -
Rops3g00757 922 Gene3D PWI domain 33 125 - -
Rops3g00757 922 Pfam PWI domain 46 115 IPR002483 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00757 Rops-Chr3 9272547 9278202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00757 K13171 - gmx:100810238 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00757 3 9272547 9278202 Rops3g00757 3 9272547 9278202 ECH