Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00755 ATGCATCAGGCTTGTCTCTACGCTTTCCCAAATCCAACTCCTACAACCACCACTTTCAAGCTTAGAAAAACACCACATTCCACTCGCACGAGACCCATTAGGAGCCAATCCATGTTGCACTCTCACACCAAAAGTACCCCAACACAGCAAAGATGGTCTCTTCACGGTATGACAGCTCTCGTCACAGGTGGAACTCGGGGAATTGGGCACGCCATTGTGGAGGAATTGATGGGATTTGGGGCCAGAGTGCATACCTGTGCAAGGAATGAAGATGAGCTCACTAAGTGTCTGAAGGAATGGAATGATTCAGGTTTTGAGGTTACTGGCTCAATTTGTGATGTGTCCATTCCACAGCAGAGGGAGGCACTAATGGAGGATGTCTCCTCTGTCTTCCAAGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAATATTCGAAAACCAATGACAGACTTTACAACTGCAGAGTTTTCCCGTCTCATTGATACCAATTTAGGATCCACCTTTCATACATGCCAACTTGCATATCCACTTCTGAAAGCATCGACAATGGGAAGTGTTGTATTTATCTCGTCTGTTTCTGGTTTTGTCTCATTGAAGTCTATGTCTGTTCAAGGTGCAACAAAAGGAGCAATTAATCAACTTACAAGAAATTTAGCTTGTGAGTGGGCAAAAGACAATATAAGGAGTAATGCAGTTGCACCTTGGTACATCAGAACTTCAATGGTAGAACAAGTGCTCAGCAACAAAGACTATCTGGAAGAGGTGTACTCTCGAACCCCTCTTAGGCGCCTAGGAGATCCAGCAGAAGTGTCTTCTCTTGTTGCCTTTCTTTGCTTACCAGCATCATCATACATCACTGGCCAGATTATATGTGTTGATGGAGGAATGTCCGTGAATGGTTTCTCCCCAACACACATCTAA 927 0.4423 MHQACLYAFPNPTPTTTTFKLRKTPHSTRTRPIRSQSMLHSHTKSTPTQQRWSLHGMTALVTGGTRGIGHAIVEELMGFGARVHTCARNEDELTKCLKEWNDSGFEVTGSICDVSIPQQREALMEDVSSVFQGKLNILINNVGTNIRKPMTDFTTAEFSRLIDTNLGSTFHTCQLAYPLLKASTMGSVVFISSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIRTSMVEQVLSNKDYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICVDGGMSVNGFSPTHI* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00755 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Rops3g00755 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Rops3g00755 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 144 IPR002347 -
Rops3g00755 308 PANTHER TROPINONE REDUCTASE 50 302 IPR045000 GO:0016491
Rops3g00755 308 MobiDBLite consensus disorder prediction 30 48 - -
Rops3g00755 308 Gene3D - 38 303 - -
Rops3g00755 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 56 300 IPR036291 -
Rops3g00755 308 PRINTS Glucose/ribitol dehydrogenase family signature 133 144 IPR002347 -
Rops3g00755 308 PRINTS Glucose/ribitol dehydrogenase family signature 262 282 IPR002347 -
Rops3g00755 308 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Rops3g00755 308 PRINTS Glucose/ribitol dehydrogenase family signature 227 244 IPR002347 -
Rops3g00755 308 PRINTS Glucose/ribitol dehydrogenase family signature 58 75 IPR002347 -
Rops3g00755 308 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Rops3g00755 308 MobiDBLite consensus disorder prediction 22 48 - -
Rops3g00755 308 FunFam Short-chain dehydrogenase reductase 43 302 - -
Rops3g00755 308 Pfam Enoyl-(Acyl carrier protein) reductase 65 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00755 Rops-Chr3 9243576 9246253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00755 50 304 Miscellaneous Gene Families AT2G29290 63.529 3.58e-120 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00755 K08081 - gmx:100799534 476.092