Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00754 ATGGATGAGGCAAGCAGGAGTAGCAGGTGGTCTTTATATGGGATGACAGCGCTGGTCACTGGTGGATCCAAAGGAATCGGAGTCTCCTCTGAGTTCAATGGCAAACTTGATATCCTCGTAAACAACGTGGGAACAAACATACGGAAAGAGACGCTGGATTTTACAAAGGAAGATTTTTCATTTCTGGTCAGTACGAATCTTGAATCTGCTTTCCATTTAAGCCAGGTTGCACATCCTTTGCTAAAAGCTTCAGAGGCTGCAAGCGTTGTTTTCACATCCTCCATTGCTGGGGTGGTATCCGCTAATATAGGATCCATATATAGTGCAACAAAAGGAGCAATCAACCAACTGACAAGAAATTTGGCATGTGAGTGGGCAAAAGACAATATTAGGACTAACTGCGTGGCACCAGGGCCAATCAAAACCCCTGTTGCTGAACATGACTTACAAGATGAGAAACTTCTTAATGGTTTTATTTCAAGAACCCCTCTTGGACGGATTGGAGAGCCTAAAGAGGTGTCATCCTTGGTGGCATTTCTCTGCTTACCTGCAGCCTCTTACATAACAGGACAGACCATCTGTGTTGATGGTGGCTTAACAGTGAATGGTCTATATGTATAA 621 0.4396 MDEASRSSRWSLYGMTALVTGGSKGIGVSSEFNGKLDILVNNVGTNIRKETLDFTKEDFSFLVSTNLESAFHLSQVAHPLLKASEAASVVFTSSIAGVVSANIGSIYSATKGAINQLTRNLACEWAKDNIRTNCVAPGPIKTPVAEHDLQDEKLLNGFISRTPLGRIGEPKEVSSLVAFLCLPAASYITGQTICVDGGLTVNGLYV* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00754 206 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 94 122 IPR020904 GO:0016491
Rops3g00754 206 Gene3D - 27 205 - -
Rops3g00754 206 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 202 IPR036291 -
Rops3g00754 206 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 126 IPR002347 -
Rops3g00754 206 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 34 45 IPR002347 -
Rops3g00754 206 PRINTS Glucose/ribitol dehydrogenase family signature 107 126 IPR002347 -
Rops3g00754 206 PRINTS Glucose/ribitol dehydrogenase family signature 16 33 IPR002347 -
Rops3g00754 206 PRINTS Glucose/ribitol dehydrogenase family signature 81 97 IPR002347 -
Rops3g00754 206 PRINTS Glucose/ribitol dehydrogenase family signature 128 145 IPR002347 -
Rops3g00754 206 PRINTS Glucose/ribitol dehydrogenase family signature 163 183 IPR002347 -
Rops3g00754 206 FunFam Short-chain dehydrogenase reductase 28 203 - -
Rops3g00754 206 Pfam Enoyl-(Acyl carrier protein) reductase 30 200 - -
Rops3g00754 206 PANTHER TROPINONE REDUCTASE 28 203 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00754 Rops-Chr3 9232184 9233777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00754 28 204 Miscellaneous Gene Families AT2G29290 66.667 6.81e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00754 K08081 - gmx:100780806 298.13