Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00745 ATGGCCAATGATCGGAAAATTGGGGTGGCCTTCGACTTCTCCAAAGGAAGCAAGATCGCTCTCAAATGGGCTATTGACAATCTCATCCGCAACGGTGACACCCTCTTCATCATCCACATCAAGCCTCCCCAACCCAGTGAATCCAAAAATCCTCTTTGGTCTACCACTGGTTCACCTCTGATCCCGTTGTCAGAGTTTCGTGAGAAGGAGGTGATGCACCATTATGAGGTGGACACTGATGCTGAGGCGTTGGATCTACTTGACATCGCTTCTAGGCAGAAACAGGTGACTGTGGTGGTAAAGCTATACTGGGGGGATGCAAGAGAGAAAACTTGTGAAGCCATTGGGGATTTGAAGCTTGACTCTTTGGTCATGGGTAGCAGAGGCTTAGGTGCCATAAAGAGGGTATTGCTGGGTAGTGTGACCAGTTATGTCACCATAAATGCGACTTGCCCTGTAACAATTGTGAAAGACTCTGCACCTTCTACCCTCTGA 495 0.4848 MANDRKIGVAFDFSKGSKIALKWAIDNLIRNGDTLFIIHIKPPQPSESKNPLWSTTGSPLIPLSEFREKEVMHHYEVDTDAEALDLLDIASRQKQVTVVVKLYWGDAREKTCEAIGDLKLDSLVMGSRGLGAIKRVLLGSVTSYVTINATCPVTIVKDSAPSTL* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00745 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Rops3g00745 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Rops3g00745 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Rops3g00745 164 FunFam Universal stress protein family protein 1 160 - -
Rops3g00745 164 PANTHER IMP2'P 1 159 - -
Rops3g00745 164 CDD USP_Like 6 156 - -
Rops3g00745 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Rops3g00745 164 Pfam Universal stress protein family 5 157 IPR006016 -
Rops3g00745 164 Gene3D HUPs 1 163 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00745 Rops-Chr3 9179233 9180576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00745 4 46 Receptor kinase-like Gene Family AT5G35380 46.512 2.93e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00745 - - gmx:100306505 278.485