Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00736 ATGTCGATAGTTCCCATAAACGAGGGTCAAGGCAGGAACGGTTCCAACTCTTCTCTGGATTTATGGGATCCATTCATGGACTTTCATTTTCCTTTCCCTCCTTCCATTTCCAATTTATTCCCTGACTTCGGGTTCGGTTTCGGTTTCGGGTCATCAGTGAATACCCGTCTGGATTGGAGGGAGACACCAAGAGCACACGTGTGGAAGGTGGTGCTTCCTGGCTTCAACAACGAAGAAGTGCTTGTTGAGCTCCAAGATGAGAGGGTGCTTCAGGTGAGTGTGGAGAGTGGCAATTTCATGAGCAGGTTTAAGATCCCTGAAGATGGCAACCTCGAACAACTCAAAGCTAACATGCATAATGGGGTTCTCATTGTCACTGTTCCCAAGTTTGAGCAACCCTCTGGGGATAGGAACATCAGGGTCATTGAGATTGAGGGCACTGATTGA 447 0.4787 MSIVPINEGQGRNGSNSSLDLWDPFMDFHFPFPPSISNLFPDFGFGFGFGSSVNTRLDWRETPRAHVWKVVLPGFNNEEVLVELQDERVLQVSVESGNFMSRFKIPEDGNLEQLKANMHNGVLIVTVPKFEQPSGDRNIRVIEIEGTD* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00736 148 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 53 143 IPR031107 -
Rops3g00736 148 Pfam Hsp20/alpha crystallin family 94 144 IPR002068 -
Rops3g00736 148 SUPERFAMILY HSP20-like chaperones 24 134 IPR008978 -
Rops3g00736 148 FunFam 18.5 kDa class I heat shock protein 15 146 - -
Rops3g00736 148 Gene3D - 16 145 IPR008978 -
Rops3g00736 148 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 48 145 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00736 Rops-Chr3 9016382 9017058 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00736 K13993 - gmx:100797426 205.297