Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00711 ATGAAAGCTTTTGTGTTTGTGTTTGTGTTTGTGACCCTTTTGCTGTGTGGTTGTGCTTGTGCCAAAGAGTGCACAAACGTTCCAACCCAATCACACACGCTCCGGTATGAGCTATTCTCATCCAAGAATGAGACATGGAAGAAGGAGGTGATGTCTCACTACCATTTGACACCAACTGATGAATCAGCTTGGGCAGATATGCTACCAAGGAAGTTGTTGTCAAAAAAAGACCAACATGATTGGGCTGTGATGTATAGGAAACTTAAGAACATGGGTGCCTCCAACTCACCTGGAGGGTTTCTCAAAGAAGTGCCCCTTCAAGATGTGAGGTTGCCGGTGGATTCCATCCATGGCAGGGCACAGCAGACTAACTTGGAGTATCTGTTGATGTTAGATGTTGACAGCTTGCTTTGGAGCTTTAGGAAAACAGCTGGTCTACCTACTCCTGGGACACCTTATGGAGGATGGGAAAGTCCTGATGTGGAGCTCAGGGGTCATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTAATGTGGGCCAGCACACAGAATGATAGCCTGAAGGAGGAAATGTCAGCTGTTGTTGCTGGTATGTCTGCCTGTCAGCAGAAAATGGGAACTGGATATCTCTCTGCATTTCCATCTGAGTTTTTTGATCGATTTGAAGCTATTAAACCAGTGTGGGCTCCCTATTACACCATTCACAAGATCATGGCTGGCCTGTTGGATCAACATACTATAGCTGGAAATCCTCAAGCTCTAAAGATGTTGACATTGATGGCAGATTACTTTTACAACCGAGTGCTGAATGTGATAACAATGTCCACTATAAATAGACACTATGAATCACTGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATACAGAGTAACGGGAGATTCAAAGCACCTATTGTTGGCTCACCTTTTTGACAAGCCATGCTTTTTAGGGCTGCTTGCAGTGCAGGCTAATGACATATCTGATTTTCATTCTAATACACATATCCCTATTGTTGTTGGAGCTCAAATGCGGTATGAAATCACAGGAGAACCACTTTATAAGGATATTGGGACATTCTTTATGGACATTATAAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAGTCGGGGAGTTCTGGCGTGATCCAAAGAGAATAGCAGACAACCTAAGATCGGGAGAGACTGAAGAAACGTGCACAACTTATAATATGTTGAAGGTTTCACGCCACCTGTTTAGATGGACCAAAGAAGTCACTTATGCAGATTATTATGAGCGTGCCTTAACAAATGCTATACTCAGTGTTCAAAGAGGAACAGATCCTGGAGTGATGGTTTATATGCTTCCACTAGGTCTTGGGGTTTCCAAGGCTAAAACTTATCATAGTTGGGGAGCACCGTATGACTCTTTCTGGTGCTGCTATGGAACAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGGGAAAGATCCTACTCTTTACATCATTCAGTACATATCAAGCACATTTAATTGGAAATCTGGAAAAATTTTGCTCAATCAGACAGTTGTTCCAGCTGCTTCATGGGACCCTTACCTACGAGTGACATTTACGTTTTCTCCTAATGAGAAAATTGGTGCTACATTGAACTTTCGAATACCATCTTGGACTCATGCGGATGGTGCCAAGGGGACATTAAATACTGAAACTCTCTCCCTGCCCGCTCCAGGAAATTTTCTGTCAATCACAAGACAGTGGAGTGCTAGTGACAAGATGACCCTCCAGTTTCCTATGACCATCAGAACAGAGACTGTAAAAGATGACAGACCTGAATATGCATCTCTTCAAGCAATTCTTTATGGTCCTTATCTTCTTGCTGGTCACACCACCAATGATCAGGACGTTAAAGCTGGAGCTAAAACAACTGTTGCAGACTGGATTACTCCAATTCCAGCCAGTTATAATAGTCAACTAGTTTCTCTTTCCCAAGACTTTGCAGAATCAACTTTTGCTTTAACAAACCTAAACCAATCACTTACATTGGAAAAACTACCTGACCCTGGCACGGAGTTGGCTCCTCATGCAACCTTTAGACTTGTCCTAGAAGAATCTTCCTCAAAGCTTTCAACATCAACTGTTTCTATTGGTAAATCAGTGATGTTAGAACCATTTGATCTTCCTGGAATGAATGTGATTCACGAAGGAGCAGACAAACCTCTTATAATTGCAGATTCTTCCCATGGTGGGCCATCTTCTGTTTTTCTTATGGTAACAGGATTGGATGGAAGAAATGAAACCATATCTTTAGAATCCCAAAACAATAAGGGTTGTTACGTGTATAGTGGTATGAGCTCTGGTGCAACAGTTAAGCTTAGTTGCAAGTCTGATTCTGACGCTAATTTTAACCTAGCAACAAGCTTTGTTGCTGGGAATGGATTCAGCCAATACCATCCTATCAGCTTTGTGGCTAAAGGGAGAAACAGGAACTTTCTTTTAGAGCCATTATTCACCTTCAGAGATGAGCATTATACAGTTTATTTCAACATTCAAGATTGA 2568 0.4198 MKAFVFVFVFVTLLLCGCACAKECTNVPTQSHTLRYELFSSKNETWKKEVMSHYHLTPTDESAWADMLPRKLLSKKDQHDWAVMYRKLKNMGASNSPGGFLKEVPLQDVRLPVDSIHGRAQQTNLEYLLMLDVDSLLWSFRKTAGLPTPGTPYGGWESPDVELRGHFVGHYLSASALMWASTQNDSLKEEMSAVVAGMSACQQKMGTGYLSAFPSEFFDRFEAIKPVWAPYYTIHKIMAGLLDQHTIAGNPQALKMLTLMADYFYNRVLNVITMSTINRHYESLNEETGGMNDVLYRLYRVTGDSKHLLLAHLFDKPCFLGLLAVQANDISDFHSNTHIPIVVGAQMRYEITGEPLYKDIGTFFMDIINSSHSYATGGTSVGEFWRDPKRIADNLRSGETEETCTTYNMLKVSRHLFRWTKEVTYADYYERALTNAILSVQRGTDPGVMVYMLPLGLGVSKAKTYHSWGAPYDSFWCCYGTGIESFSKLGDSIYFEEEGKDPTLYIIQYISSTFNWKSGKILLNQTVVPAASWDPYLRVTFTFSPNEKIGATLNFRIPSWTHADGAKGTLNTETLSLPAPGNFLSITRQWSASDKMTLQFPMTIRTETVKDDRPEYASLQAILYGPYLLAGHTTNDQDVKAGAKTTVADWITPIPASYNSQLVSLSQDFAESTFALTNLNQSLTLEKLPDPGTELAPHATFRLVLEESSSKLSTSTVSIGKSVMLEPFDLPGMNVIHEGADKPLIIADSSHGGPSSVFLMVTGLDGRNETISLESQNNKGCYVYSGMSSGATVKLSCKSDSDANFNLATSFVAGNGFSQYHPISFVAKGRNRNFLLEPLFTFRDEHYTVYFNIQD* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00711 855 Gene3D - 712 845 - -
Rops3g00711 855 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Rops3g00711 855 SUPERFAMILY Six-hairpin glycosidases 159 477 IPR008928 GO:0005975
Rops3g00711 855 Pfam Beta-L-arabinofuranosidase, GH127 113 630 IPR012878 -
Rops3g00711 855 SUPERFAMILY AbfB domain 755 836 IPR036195 GO:0046373|GO:0046556
Rops3g00711 855 PANTHER PROLINE-TRNA LIGASE (DUF1680) 19 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00711 Rops-Chr3 8619565 8629208 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00711 K09955 - gmx:100781521 1420.22