Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00708 ATGAAGGCTTTTGTGTTTGTGTTTGTGACCCTTTTGCTGTGTGCTTGTGCTTGTGCCAAAGAGTGCACAAACATTCCAACCCAATCACACACGCTTCGGTATGAGCTATTATCATCCAAGAATGAGACATGGAAGAAAGAGGTGACGTCTCACTACCATTTGACACCAACTGATGAATCAGCTTGGGCAGATATGCTACCGAGGAAGTTGTTGTCAGAAAAAGACCAACATGATTGGGTTGTGATGTATAGGAAAATTAAGAACATGGGTGCCTCCAACTCACCTGGAGGGTTGCTCAAAGAAGTGCCCCTTCAGGATGTGAGGTTGCCGGTGGATTCCATCCATGGCAGGGCACAGCAGACTAACTTGGAGTATCTGTTGATGTTAGATGTTGACAGGTTGCTTTGGAGCTTTAGGAAAACAGCTGGTCTACCTACTCCAGGGACACCTTATGGAGGATGGGAAAGTCCAGATAAGGAGCTCAGGGGTCATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTATTGTGGGCCAGCACTCAGAATGATAGCCTGAAGGACCAAATGTCAGCTGTTGTTGCTGGTATGTCTGCCTGTCAGCAGAAAATGAGAACTGGATATCTCTCTGCATTTCCTTCCGAGTTTTTTGATCGATTTGAAGCTATTGATCCTGTGTGGGCTCCGTATTACACCATTCACAAGATCATGGCCGGCCTGTTGGATCAACATACTGTAGCTGGAAACCCTCAAGCTCTAAAGATGTTGACATGGATGGCTGATTACTTTTACAAACGAGTGATGAATGTGATAACAACGTACACTATAAATAGACACTATGAATCACTGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATACCAAGTAACGGGAGATTCAAAGCATCTGTTATTGGCTCACCTTTTTGACAAGCCATGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATATCCGATTTTCATTCTAATACACATCTCGCTGTTATTGTTGGAGCTCAAATGCGGTATGAAATCACAGGCGAGCCACTTTATAAGGATATTGGGACATTCTTTATGGACATTATAAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAGTCGCGGAGTTCTGGAGTGATCCAAAGAGAATAGCAGACAACCTAAAATCAGTAGAGACCGAAGAAACATGCACAACTTATAATATGTTGAAGGTTTCGCGCCACCTGTTTAGATGGACCAAAGAAGTCACTTATGCAGATTATTATGAGCGTGCCTTAACAAATGGTATACTCAGTGTTCAAAGAGGAACAGATCCTGGAGTGATGATTTACATGCTTCCACTAGGTCTTGGGGTTTCCAAGGCTAAAACTTTTCATAGTTGGGGAACACCGGATGACACTTTCTGGTGCTGCTATGGATCAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGAGAAAGATCCTACTCTTTACATCATTCAGTACATATCAAGCACATTTAATTGGAAATCTGGGAAAATTTTGCTCAATCAGACAGTTGTCCCAGCTGCTTCATGGGACCCTTACCTACGAGTGACATTTACGTTTTCTCCTAATGAGAAAATTGGTGCTACATTGAACTTTCGAATACCATCTTGGACTCATGTGGATGGCGCCAAGGGGACATTAAATACTGAAACTTTATCTCTGCCAGCTCCAGGAAATTTTCTGTCAATCACAAGACAGTGGAGTGCTGGTGACAAGCTAACCCTCCAGTTACCTCTGACCATCAGAACAGAGGCTGTAAAAGATGACAGGCCTAAATATGCATCTCTTCAAGCAATTCTCTATGGTCCTTATCTTGTTGCCGGTCACACCACCAATGATCAGGACATTAAAGCTGGGGCTAAAACAGCTGTTGCAGACTGGATTACTCCAATTCCTGCCAGTTACAATGGTCAACTAGTTTCTCTTTCCCAAGACTTTGCACAATCAACATTTGTTTTGACAAACTCAAACCAATCACTTACAATGCAAAGACCACCGGAACCTGGCACTGAGTTGGCTCCTCATGCAACCTTTAGACTTGTCCCAAAAGATGCTTCCTCAAATCTTTCAACACCAACTGTTGGTATTGGTAAATCAGTGATGTTAGAACCATTTGATCTTCCTGGAATGAATGTCATTCACCAAGGAGCAGACAAACCTCTTATCATTGCAGATTCTTCCAATGGTGAGCCATCTTCTGTTTTTCTTGTGGTACCAGGATTGGATGGAAGAGACGAAACCATATCTTTAGAATCCCAAAGCAATAAGGGTTGTTACGTGTATAGTGGTATGAGCTCTGGTGCACAAGTTAAGCTCAGTTGCAAGTCTAATTCTGAAGATAATTTTAATCTAGCAACAAGCTTTGTTACTGGGAATGGATTCAGCCAATACCATCCAATCAGCTTTGTGGCTAAAGGGAAAAACAGGAACTTTCTTTTGGAGCCATTATTCGCCTTCAGAGATGAGCATTATACAGTTTATTTCAACATTCAAGATTGA 2562 0.4239 MKAFVFVFVTLLLCACACAKECTNIPTQSHTLRYELLSSKNETWKKEVTSHYHLTPTDESAWADMLPRKLLSEKDQHDWVVMYRKIKNMGASNSPGGLLKEVPLQDVRLPVDSIHGRAQQTNLEYLLMLDVDRLLWSFRKTAGLPTPGTPYGGWESPDKELRGHFVGHYLSASALLWASTQNDSLKDQMSAVVAGMSACQQKMRTGYLSAFPSEFFDRFEAIDPVWAPYYTIHKIMAGLLDQHTVAGNPQALKMLTWMADYFYKRVMNVITTYTINRHYESLNEETGGMNDVLYRLYQVTGDSKHLLLAHLFDKPCFLGLLAVQANDISDFHSNTHLAVIVGAQMRYEITGEPLYKDIGTFFMDIINSSHSYATGGTSVAEFWSDPKRIADNLKSVETEETCTTYNMLKVSRHLFRWTKEVTYADYYERALTNGILSVQRGTDPGVMIYMLPLGLGVSKAKTFHSWGTPDDTFWCCYGSGIESFSKLGDSIYFEEEEKDPTLYIIQYISSTFNWKSGKILLNQTVVPAASWDPYLRVTFTFSPNEKIGATLNFRIPSWTHVDGAKGTLNTETLSLPAPGNFLSITRQWSAGDKLTLQLPLTIRTEAVKDDRPKYASLQAILYGPYLVAGHTTNDQDIKAGAKTAVADWITPIPASYNGQLVSLSQDFAQSTFVLTNSNQSLTMQRPPEPGTELAPHATFRLVPKDASSNLSTPTVGIGKSVMLEPFDLPGMNVIHQGADKPLIIADSSNGEPSSVFLVVPGLDGRDETISLESQSNKGCYVYSGMSSGAQVKLSCKSNSEDNFNLATSFVTGNGFSQYHPISFVAKGKNRNFLLEPLFAFRDEHYTVYFNIQD* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00708 853 SUPERFAMILY Six-hairpin glycosidases 157 438 IPR008928 GO:0005975
Rops3g00708 853 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Rops3g00708 853 Gene3D - 711 841 - -
Rops3g00708 853 PANTHER PROLINE-TRNA LIGASE (DUF1680) 17 851 - -
Rops3g00708 853 Pfam Beta-L-arabinofuranosidase, GH127 111 627 IPR012878 -
Rops3g00708 853 SUPERFAMILY AbfB domain 746 834 IPR036195 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00708 Rops-Chr3 8582388 8588845 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00708 K09955 - gmx:100781521 1407.89