Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00697 ATGTCGAAAACCACCGAATCCGGCGGCAACTCTCACTCCGACCACCTTGAAACTCCGATACTAGACAGGGAGTCACCTATGCTCCTCCACTCCATTTCGGAGCACGGTGGCTATGCCTACGTTAGCATGGCGGTGCTGGCTTCCGGCGGCGACATTCGCGGGGCGGAGGCGGCGAGGGAGATGGCGTGGGAGCAGCTGCACTCTGGACCGTGGGACTCGGTGCTGCCGGTGTGGCGTGACGCGTACTCCATGGCGTGCCTCCACGTGGCGAAGCACCACTATGGTAATGGTGAGTTCAAGGAGGCACTTAGGGTTTTGGATATGGGGATCATTATGGGAGGGATGTTACTCAGAAAGGATTTGGACTCTGTCATAGAGAAGGTATCGGAAAAGGCGATGAGTGTTAGGGTTTCTGAAAGAAGTAATCAAGGTTTTGGGAACTCCGAGAATCGACTTGTTGATTATGAATTTGATGTGTCTAAGGTGCTCCGACTTTTACCTGTTAAGTCTCTTTCTTCTAAGCTTGTGGTGAAGAGTTCTGCACTGTCGTTGGAAAAGTTCCTGAAAGATCATTACCTGTCTGGCTCCCCAGTTATTATCAGTGATTGTATGGCTCACTGGCCAGCCAAGACAAAATGGAATAACATAGATTACTTGCTAAAAGTTGCTGGTGATCGCACGGTTCCAGTTGAGGTTGGGAAGAACTACTTATGTGCAGAGTGGAAGCAAGAACTAATTACATTTTCAGAGTTTCTTGAGCGGATGAAGGCCAATGACTGTTCTCCCGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAGCTTCGAAAAGATATATTTATTCCTGACTATTGTTTTGCTGGTGGAGGGGAGCTAAGATCTCTTAATGCTTGGTTTGGTCCAGCTGGAACAGTAACACCACTACACCATGATCCACATCATAACATACTGGCTCAGGTTGTTGGGAAAAAATACATTAGGCTTTATCCAGCATCTTTGTCTGAGGAACTTTTCCCCTACTCGGGTACCATGCTTAGCAATTCTAGCCAGGTTGATTTAGATGACGTAGATGAAAGCAAGTTTCCAAAGGTGCAAGACTTGGAATTTGTAGATTGTATTTTAGAGGAAGGTGAAATGTTATATATCCCGCCAAAATGGTGGCACTATGTGCGATCTCTAACTACCAGTTTATCAGTTAGCTTTTGGTGGAGCGAGGGTGAAAGTTCAGCTACATCCTAA 1254 0.4665 MSKTTESGGNSHSDHLETPILDRESPMLLHSISEHGGYAYVSMAVLASGGDIRGAEAAREMAWEQLHSGPWDSVLPVWRDAYSMACLHVAKHHYGNGEFKEALRVLDMGIIMGGMLLRKDLDSVIEKVSEKAMSVRVSERSNQGFGNSENRLVDYEFDVSKVLRLLPVKSLSSKLVVKSSALSLEKFLKDHYLSGSPVIISDCMAHWPAKTKWNNIDYLLKVAGDRTVPVEVGKNYLCAEWKQELITFSEFLERMKANDCSPGGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELFPYSGTMLSNSSQVDLDDVDESKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWSEGESSATS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00697 417 ProSiteProfiles JmjC domain profile. 275 417 IPR003347 -
Rops3g00697 417 SMART cupin_9 266 417 IPR003347 -
Rops3g00697 417 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 80 412 - -
Rops3g00697 417 FunFam lysine-specific demethylase JMJ30 175 408 - -
Rops3g00697 417 Pfam Cupin-like domain 186 410 IPR041667 -
Rops3g00697 417 SUPERFAMILY Clavaminate synthase-like 181 409 - -
Rops3g00697 417 Gene3D Cupin 175 409 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00697 170 408 Acyl Lipid Metabolism Gene Families AT3G45880 24.662 3.26e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00697 K24444 - gmx:100813075 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00697 3 8468722 8474423 Rops3g00697 3 8468722 8474423 ECH