Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00678 ATGGCTCCATCGGATGTGTGTCCAACTGAGGACGCAGTTCAGGCATTCTTAGAACATTTGGTTGACCCATTGCTGTCAGAAAAATCATCTGTCAGAGATAATCCTACACCATCTCAACAGCAATTAATTGCCAACCAGGTGCATGCTGTTGTCTTACTGTACAACTACTACCACAGGAAATGGCATCCAGAGCTAGCATATCTGCCATTTAATGAATTTTGCAAGTTGACTGTGGTTATGAGGCCACCTTTATTAGCATATATGCAATTCATGCAAAAGTTAAATGAAGAAGAGCTCATTGATGTGGATAAGCAGCTATCATTAACAGAAAAAATGATTATGAATGCATGTGATTTATCTAAATGTTTAGATGCATCAAAGAATGTTCCTAATGTAGAGGGACGGCCCATTACAAAAGTTGCTGTCCTTTTAATCGACAGTAAGAAGAAGTACTGCTTTTTGCTGTTTGGTTCTATCACTAAGGGGGTATGGTCTGTGGTTGAAAAAAGTCTAGACACCTCCAGCCAAACTTCTGAAGTTACATCGGGAACAAACTATACATACAAGAAGAAAAGAGTCATTAAAAAGCCTACAAAAGATGAATTAAAAGTTGATGAAGCTGGATTTCTGCAAGTTGGGTATTCTGCTGTAAAGGAAGCCACAGGTATCAATAACACTAATATTATGCTTTTGGAAAGCTACACTGTCTATTCTCAAAGCAAAGAGAAGGAAGCTTCTCGCTTTTATATAATGCAGTGCTCCCAGTCAATCAATCAGGAGGGTATTCAAGTTCCTCTCAAAGATGTAATTGAAAGCTTGCAGGGACCTTTGGTCAAAAAGAGTTCCAGCAGTTGGACAATCACTCCAGTTGTGGATTACTTCCATGTGCTTCCTTATTCTGAAATAATCTCAAAGTGGATTTCTAGAGAAGCATTCTCAAATAGTTTACAAAATTCAAGGGTAACAAAGAAAAATATAATAGTGGACAGCCCTGAAGGGACAGAGTCTTATGTAAGTAAGGACTCATCTACCGATCTTGATAGTAAGCCAAGCAGTGATAATATTGGATCGCTGAAGCAGAAAAAGAATGATGGAAGCTGTACACTTAGACTATCTGATTCTATCAAGGAATCCTGTGAAATGGATGTGAACAAGTCTTCAATTTTTCCATCTCAAAATAAAGAAAAATGCCAGAATATTTTCAATATTATACAAGATGGTGAAGATCTTGATAGTAAGCCAAGCAGTGATAATATTGGACCGCTGAAGCAGAAAAAGAATGATGGAAGTTGTACACTTAGACTATCTGATTCTATCAAGGAATCCTGTGAAATGGATATGAACAAGTCTTCAATTTTTCCATCTCAAAATAAAGAAAAATGCCAGAATATTTTCAATATTATACAAGATGGTAAAGATCTTGAAGAAAGCAATCCATCTGTGCGGTATAACTCAAATGGCTGTGCAAGTGCTGTTAAGCACCTGTGCACAAACTTACCTCTTTCGTCCAAGGACACTTGTGACGGCCAGATAGAGGCACCTCACTGCCGCCACCCACCATCAGCCAGATCCCTTTCTACCAATTCCCATCAGGCTGCAAAGGTTGATTCAACAAGGATGCTTATCACTGAAGGTGAAATCAGCAATCTTGCTTCTTGCCACGAGATTTGTGCTAATGGGCCCAGTACCTCATCTGAAAAAGACACAATAGATGACTGTACTCAGACGGCAAATCATTCTAACTCTGATCTAGAGAAGCTCCGAATTCTTTTAGATTCGAAACAGACACTGTCACAAACTGCCCTAACTGCTCTGTTACGAAAGAGGAATGAGCTGGCCCTTCAGCAGCGCAAGATAGAGGATGAGATTGCTATTTGTGATAAAAAAATTCAGAGAATTTTAACTGTAGATGGCGAAGCTGACTTTGAATTGAAGATAGAATCCATTATAGAAGGCTGTAATGATGTATGGGAACTAGATGGTGTATGTGGTGAAAACAATTGGGTCCTACCAACTTATCATCTGTCTCAATCTGATGGTGGATTCCAAGCTAATGTAACTGTTAAAGGAGTCGAATTTCAGTGTTCATATGGGGGTGGCGTGTGTTCCAATCCTCGCGAAGCAAGAGAATCAGCTGCTGCTCAGATGTTGACCAACTTGAGAAGTATGGCAAAATTACCCAACTAA 2187 0.3928 MAPSDVCPTEDAVQAFLEHLVDPLLSEKSSVRDNPTPSQQQLIANQVHAVVLLYNYYHRKWHPELAYLPFNEFCKLTVVMRPPLLAYMQFMQKLNEEELIDVDKQLSLTEKMIMNACDLSKCLDASKNVPNVEGRPITKVAVLLIDSKKKYCFLLFGSITKGVWSVVEKSLDTSSQTSEVTSGTNYTYKKKRVIKKPTKDELKVDEAGFLQVGYSAVKEATGINNTNIMLLESYTVYSQSKEKEASRFYIMQCSQSINQEGIQVPLKDVIESLQGPLVKKSSSSWTITPVVDYFHVLPYSEIISKWISREAFSNSLQNSRVTKKNIIVDSPEGTESYVSKDSSTDLDSKPSSDNIGSLKQKKNDGSCTLRLSDSIKESCEMDVNKSSIFPSQNKEKCQNIFNIIQDGEDLDSKPSSDNIGPLKQKKNDGSCTLRLSDSIKESCEMDMNKSSIFPSQNKEKCQNIFNIIQDGKDLEESNPSVRYNSNGCASAVKHLCTNLPLSSKDTCDGQIEAPHCRHPPSARSLSTNSHQAAKVDSTRMLITEGEISNLASCHEICANGPSTSSEKDTIDDCTQTANHSNSDLEKLRILLDSKQTLSQTALTALLRKRNELALQQRKIEDEIAICDKKIQRILTVDGEADFELKIESIIEGCNDVWELDGVCGENNWVLPTYHLSQSDGGFQANVTVKGVEFQCSYGGGVCSNPREARESAAAQMLTNLRSMAKLPN* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00678 728 MobiDBLite consensus disorder prediction 335 365 - -
Rops3g00678 728 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 682 722 IPR014720 -
Rops3g00678 728 SUPERFAMILY dsRNA-binding domain-like 653 722 - -
Rops3g00678 728 MobiDBLite consensus disorder prediction 333 365 - -
Rops3g00678 728 Coils Coil 602 622 - -
Rops3g00678 728 CDD DSRM_SF 663 717 - -
Rops3g00678 728 Gene3D - 645 722 - -
Rops3g00678 728 PANTHER ALEURONE LAYER MORPHOGENESIS PROTEIN 1 657 - -
Rops3g00678 728 MobiDBLite consensus disorder prediction 408 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00678 Rops-Chr3 8265055 8275821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00678 - - tpra:123916860 691.034