Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00667 ATGGCAACTTCTTCACTGTTCCGCAGTGTTCGGAGAGCTTCCTCTGTTCTCAGATTCTCGTATGCTGCCACCTCGTTTTCGGTCTCTCCCAGGTCAGTTGGGAGGACCCAAATATCTATATGCTCTCCATTCAGGAACTGTATAAATCAAGGTTCTTGGTGGGGTTTGAGAGAGTTGAGTTATGGCACGGTTAATCTAGTGATAAGTGGAGGGAAGACCAAGTTTGAGACTCAGGAGGTTGAGACTCCGAAGAAAGATAAGTGGAAGACCAAGAAGAGGTTGAAGTTGCAGAGGAAGAGAGAGAAGGAGAAGAGGAAAGCAGCAAATAGGAGAGATCCCCGTAGACTTGGTGTCAAAGGGAAGAAGAAGAAGCAGAAGTTTGCTGATGCTGAAGAGAGAATCAAGTACAAGATTGAAAAAGCTAGAATTAAGGAAGCATTACTAGTAGAAAGGCTCAATCGATATGAAGTTTCTAGAGTTCAGGGTCCAGTTGTAAAACCTGATGGCTTGACTGGAGAGGAACGGTTTTATTTGAAGAAAATGGCTCAGAAGAGGTCTAATTATGTACAAGTTGGCAGAAGAGGATTATTTGGAGGGGTTATTCTCAATATGCATATGCACTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAACCTGGTCAAGTACATGAGTATGCACAAGAACTTGCCAGATTGAGTGGTGGTATTCCAATTCAAATAATTGGGGATGACACTATAATATTTTATCGCGGAAAGAACTATGTACAGCCTGAGGTTATGTCGCCAATAGATACATTATCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTTGAGTCAGTTAGGCGCTTCATTGCTATTGCTGAGAAAGAATTAGAGCTATATTACAGACACATTGCACTTTATGGTGACCCAAATAACCGTAATCCCTTGTCAATGCTGGATGGTCCAAGAGGAAACTCGAGAGAAAAAAGGAATCATGGAATCCATGATAAAAGAAATCTTGATTTGAGTAGTGATTATTTTTCAGCCAATCTTTCAGAGACAGAAGCAGATTCCTCAGACATGGAGCTCTCATCAGAAACTGAAGATAATTTTGAAAATGGAAACTTTTCAACTAATGAATCAGATTCTGAAGAGGAGAGCATGTTGGACTCCACAGGTTCATCATCAATGTCTAAACATAACCAACATTATAATAATCAATATTTGTTATCCGAACAAATTCCAATCACTAGAGATTAG 1266 0.4013 MATSSLFRSVRRASSVLRFSYAATSFSVSPRSVGRTQISICSPFRNCINQGSWWGLRELSYGTVNLVISGGKTKFETQEVETPKKDKWKTKKRLKLQRKREKEKRKAANRRDPRRLGVKGKKKKQKFADAEERIKYKIEKARIKEALLVERLNRYEVSRVQGPVVKPDGLTGEERFYLKKMAQKRSNYVQVGRRGLFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPIQIIGDDTIIFYRGKNYVQPEVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNNRNPLSMLDGPRGNSREKRNHGIHDKRNLDLSSDYFSANLSETEADSSDMELSSETEDNFENGNFSTNESDSEEESMLDSTGSSSMSKHNQHYNNQYLLSEQIPITRD* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00667 421 Gene3D - 170 269 IPR035920 -
Rops3g00667 421 MobiDBLite consensus disorder prediction 325 340 - -
Rops3g00667 421 MobiDBLite consensus disorder prediction 313 340 - -
Rops3g00667 421 Coils Coil 91 111 - -
Rops3g00667 421 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 18 405 IPR040286 -
Rops3g00667 421 MobiDBLite consensus disorder prediction 83 124 - -
Rops3g00667 421 MobiDBLite consensus disorder prediction 88 105 - -
Rops3g00667 421 Pfam CRS1 / YhbY (CRM) domain 170 254 IPR001890 GO:0003723
Rops3g00667 421 SUPERFAMILY YhbY-like 170 264 IPR035920 -
Rops3g00667 421 SMART CRS1_YhbY_2 170 254 IPR001890 GO:0003723
Rops3g00667 421 ProSiteProfiles CRM domain profile. 168 265 IPR001890 GO:0003723
Rops3g00667 421 MobiDBLite consensus disorder prediction 370 421 - -
Rops3g00667 421 MobiDBLite consensus disorder prediction 355 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00667 Rops-Chr3 8134509 8137730 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00667 - - vun:114168415 568.54