Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00659 ATGGGGTTGGAATCGGTGGGAGATTTAGCGATCAACATCATTCTGGAAAGGTTAGGCCCCGAAGACATTGCCAGAGTTGGTTGTGTCAGCAAGAGGTTTAGGTCTTTCGCTTCAGATAATGATGCTCTTTGGCTCAAAATTTGCCTCCATGATCTTGCTTTGACTCAACCTGTTGATCATCTTGGAAACCCTCTCCCTTCCTTCAAGGCAACTTATCAAACTTGGAGAGAAGCTTTTGTTATGTATCCTTGGTCTCTTGTTAAGCGTGTAAAAAGGTGCTGGGACAGGATAAAGACCTGGCTGACCAATAATTTTCCAGAAGCTGAGGCCACTCTTCGTAAAGGTGCATCAGAAGCTGAGATTCAAGAGTTGGAGAATGTCTTAAAAGTGAAATTGCCTCTTCCTACAAGGATCCTTTACCGCTTTCATAATGGGCAAGAAATAGCAAAAGCAGATCTCGAAACTAATACATTTGGCAGTTCTTTGGGTCTCATTGGTGGCTACTCCTTCTATAGTCATTTTGTGAATGTTTATCTATTACCTATAAGTCAGGTAATCCTAGAAACTCGACAACTTATGCGTCGCCTAGGCTTTTTAAGAAGATCCAAATATGTTCTTGTGGCTGCCTCATCCACGTACAATGAGAAGTTGTTTTTCCTCAACTGTTCCAATGGTCAACTATATGTTGGAACCAGGAATGTTTTTACTCATAGAGACATGATCCCTTGTGTACCTCATGCTCTGATCAGTTTACATCATGAGTTGAATAGTGAACAGCAACAGGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGCCGATTACAACATGGCTTTATCAAACTTCATGAAGAAGGAAATGAGAGAAGCATTAATCTTTTTCCAGAAGAACCTCCTCTTTGTTCAACGACTGTAACCAATGGTGTGAAGGTTCATGCTTCTGCATTGCTCATCCCTGAGTTGGTTGATCTTCAAGATGACCTTGATAAGTACTTATTTGCTTATTCAATCCGTATGTCCCTTGAACCTCAAGGATGCATCATCAATGGAATGTCCTTCAGCTCTTGCCAACTCCATTGGAGGCACTGGATCATCCGTGCTAATGATATTGTAGTATCTGATGTCAATGGAGAAGCTGTTATAGGAAGGTTCCCACTTTTACGTCCAGGTGATAAAGAATTTGTTTATCAGAGTTGCACACCTCTACCAACACCATCAGGTTCCATTGAAGGTTCTTTTACATTTTTACCTGGCAGATTGTCAGACCCAAAAGGAGACCCTTTCCTGGTTACAGTGGCACGCTTCCCTCTTCAGCTGACGGATTATGTTTTCTGA 1335 0.4195 MGLESVGDLAINIILERLGPEDIARVGCVSKRFRSFASDNDALWLKICLHDLALTQPVDHLGNPLPSFKATYQTWREAFVMYPWSLVKRVKRCWDRIKTWLTNNFPEAEATLRKGASEAEIQELENVLKVKLPLPTRILYRFHNGQEIAKADLETNTFGSSLGLIGGYSFYSHFVNVYLLPISQVILETRQLMRRLGFLRRSKYVLVAASSTYNEKLFFLNCSNGQLYVGTRNVFTHRDMIPCVPHALISLHHELNSEQQQDAMLLWLEEHGRRLQHGFIKLHEEGNERSINLFPEEPPLCSTTVTNGVKVHASALLIPELVDLQDDLDKYLFAYSIRMSLEPQGCIINGMSFSSCQLHWRHWIIRANDIVVSDVNGEAVIGRFPLLRPGDKEFVYQSCTPLPTPSGSIEGSFTFLPGRLSDPKGDPFLVTVARFPLQLTDYVF* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00659 444 PANTHER F-BOX PROTEIN SKIP16 1 444 - -
Rops3g00659 444 SUPERFAMILY F-box domain 13 81 IPR036047 GO:0005515
Rops3g00659 444 ProSiteProfiles F-box domain profile. 1 47 IPR001810 GO:0005515
Rops3g00659 444 Gene3D - 8 94 - -
Rops3g00659 444 Pfam F-box-like 14 49 IPR001810 GO:0005515
Rops3g00659 444 Gene3D ApaG domain 300 444 IPR036767 -
Rops3g00659 444 SUPERFAMILY SMI1/KNR4-like 93 224 IPR037883 -
Rops3g00659 444 SUPERFAMILY ApaG-like 305 442 IPR036767 -
Rops3g00659 444 Pfam ApaG domain 325 416 IPR007474 -
Rops3g00659 444 ProSiteProfiles ApaG domain profile. 303 444 IPR007474 -
Rops3g00659 444 Gene3D - 95 236 IPR037883 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00659 K10290 - gmx:100809876 768.074