Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00655 ATGGAGGTTGACGATCGGTTCACAGATTTGAACCCTAAGACGTGCGTGGTTTTAGGCGGAAGAGGATTCCTCGGAAGATCGTTGGTGCTGAGGTTGTTGAAACTCGGTAACTGGATCGTCCGAGTTGCCGATTCAACTCAGTCCCTCCAACTCCACCACTCCGAGTCACTCCTCCAACAAGCTCTCTCTTCTTCTCGCGCCTCTTACTTCCATCTCGACCTTCGCGATAAACGCAACATCGTCAAAGTTCTAGAAGGTTCTTCCGTCGTGTTTTATATGGACGTTGCTGGCTTCAATGCAAATGATTTCTTCAGTTGTTACAAGCTTGTAGTTCAAGGTGCAAAGAATGTGATTAGTGCTTGCAGAGAATGTAGAGTGAAACGCTTAATATACAATAGTTCTGCAGATGTTGTATTTGATGGTCTACGCGATATACATAATGGAGATGAATCGTTGACATATCCATGGAAAATGGACAACATGTTAAGTGACCTTAAGGCTCAAGCAGAAGCATTGATCCTTAGTGCCAATGACATTGATGGCCTGTTGACATGTTCACTTCGTCCTAGTAATGTTTTTGGACCTGGTGACTCAGAATTTGTGCCATATTTTCTAAAGTTAGCAAGATATGGTTTCGCAAAGTTTATTATAGGGACTGGTGATAATCTTTCAGACTTCACCTTTTCCGAGAATGTTACTCATGCCCATATTTGTGCCGAAGAAGCCTTAAATTTCCAAACAGTTTCTGTGGCTGGAAAGGCATTTTTTATCACAAATCTTGAGCCTATGAAGTTCTGGGAATTTCTCTCACTTATGTTGGAAGGTCTTGGATATCAAAGGCCATTCATCAAACTTCCTGCTTATTTTGCGCAATACATTCTCTCAGTTTTAAAGTGGTTACAAGAAAAGTTGGGACCCAGATACTTCTGTTATCCTTTATTAGTTCATTTTTTTCAGTTAGCTTTACACACCCGAACTTTCAACTGCACGGCAGCTCAGAAAGATATTAAATACTCACCAATAGTCTCCCTTGAGGAAGGTGTCACATTAACCACAGAATCATTCTCTCATTTAGCCAGAGATTCATCTTCAAGATGCTGTGGTTCCGCTGAACAGTCAAAAGCAGATAAGCTGCTTGGCGGTGGAAAAGTGGCTGACATTTTGTTGTGGAGAGACGAGAAGACATCCTTCACATATTTCCTTGTTCTGGTTTTTTTGTCTTATTGGTTTTTCCTTTCTGGAAGCACTTTTATATCATGTGCTGCGAGGCTTTTGCTGCTTGCCACTTTATTTCTCTATGGACATGGTTTTCTACCATCAAAGCTATTTGGTTTCCCTATACAGAGGATGCCCGTGTCTAATTTTGAGATCTCTGATACGGTAGTGAAAGATTCAGTTACAACTACAGTACATATATGGAACAAGGGTTTTCAAAACATTAAAGGACTGGCCCAAGGGGACGATTGGTCTGCATTCTTCAAGGTTGCAGTCATTCTTTACCTGCTGAAGTTGGTCCTGTCAAAGTGGTTGACAACATTTATAGGCACAGGTCTGGTCTTCGCATTTATGGCATTTTTTGTTTACGAGCAATATGAATCAGAAATTGATGGAATAGTGGATATCCTATTCACTAGTTGCAGTCATTCTTTACCTGCTGAAGTTGGTCCTGTCAAAGTGGTTGACAACATTTATAGGCACAGGTCTGGTCTTCGCATTTATGGCATTTTTTGTTTACGAGCAATATGA 1746 0.4107 MEVDDRFTDLNPKTCVVLGGRGFLGRSLVLRLLKLGNWIVRVADSTQSLQLHHSESLLQQALSSSRASYFHLDLRDKRNIVKVLEGSSVVFYMDVAGFNANDFFSCYKLVVQGAKNVISACRECRVKRLIYNSSADVVFDGLRDIHNGDESLTYPWKMDNMLSDLKAQAEALILSANDIDGLLTCSLRPSNVFGPGDSEFVPYFLKLARYGFAKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKAFFITNLEPMKFWEFLSLMLEGLGYQRPFIKLPAYFAQYILSVLKWLQEKLGPRYFCYPLLVHFFQLALHTRTFNCTAAQKDIKYSPIVSLEEGVTLTTESFSHLARDSSSRCCGSAEQSKADKLLGGGKVADILLWRDEKTSFTYFLVLVFLSYWFFLSGSTFISCAARLLLLATLFLYGHGFLPSKLFGFPIQRMPVSNFEISDTVVKDSVTTTVHIWNKGFQNIKGLAQGDDWSAFFKVAVILYLLKLVLSKWLTTFIGTGLVFAFMAFFVYEQYESEIDGIVDILFTSCSHSLPAEVGPVKVVDNIYRHRSGLRIYGIFCLRAI* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00655 581 FunFam Reticulon-like protein 6 360 - -
Rops3g00655 581 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 13 355 - -
Rops3g00655 581 ProSiteProfiles Reticulon domain profile. 384 542 IPR003388 -
Rops3g00655 581 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 286 IPR002225 GO:0003854|GO:0006694|GO:0016616
Rops3g00655 581 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 356 IPR036291 -
Rops3g00655 581 Gene3D - 6 359 - -
Rops3g00655 581 Pfam Reticulon 384 540 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00655 Rops-Chr3 8039624 8047545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00655 14 362 Lipid Metabolism Gene Families AT2G33630 28.989 4.54e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00655 K23558 - gmx:100794808 853.588