Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00629 ATGGCGTCTCTCTCACTCGCACTCCCTTCCAATCCCAAAGTGCCCAAATGGTTCTCTCCTTTCCATTGTTCCAATTTTACCAACAACTCGAGTTTCAGGCCTTCGCCAACGGTTCCGCTTCATTCCTCTCAGGGAAGAAGCATTGCACTGCCGGCAAATGGACAGGATGAGAGCTTGGGGAGAGTGAACACTGCATCAATCACAAACGACGACGTTTTATGCAGCAATTCTCTGGTGCTTCAGAAAAATGACCTACCTCCTCTTGTCAGTGCATTGAAAGCCTCAGCTTTACAAAATACTGCCAGTTTTCACTTTCCTGGACATAATAGAGGCAATGCTGCACCTGCTTCGATGGCTCGGCTCATTGGAATAAGACCATATGTTCATGACTTGCCTGAGCTTCCAGAGCTCGACAACCTCTTTTGTCCCCAGGGTCCCATATTTGAAGCACAAAGAGAAGCAGCCAAACTGTTTGGATCGTCAGAGACATGGTTTCTTGTTGGAGGTACTACTTGTGGGATCCAGGCAGCAATAATGGCAACCTGTTCACCAGGAGAATCTCTGATTCTTCCTAGGAATTGTCATTTGTCAGCTATATCTGCTATGGTATTATCTGGTGCAGTGCCTAAGTACATCATTCCAGATTATAAGAATGATTGGGATATCGCTGGTGGTGTCACTCCATCACAGGTATTGAAAGCTATCCAGGAACTAGAAATGGAAGGGAAAAAACCAGCAGCAGTTTTCATCACTTCACCTACTTATCATGGTATTTGCAGTGACTTGAGTGAGATTTCTGAGTTGTGTCATTCTCGAAAAATTCCTTTGATTGTAGATGAAGCTCATGGTGCACATCTAGGATTTCATTCTGAACTGCCTAACTCAGCCCTCCAGCAAGGGGCTGATCTGACTGTACAGTCTACTCACAAAGTCCTGTGTTCTCTTACTCAGTCATCTATGCTGCACATGTCGGGTAATACTGTAGATAAGGAAAAAATTTCTAGATGTCTCCAAACTCTTCAAACCACAAGCCCTAGTTACCTACTTTTGGCATCCCTAGATGCTGCTAGAGCTCAACTTAGTGAAAGCCCTGATATTGTTTTCAACCAAGCAATCAAATTAGCCTATGAAGCAAAGTGCCAGCTAAAACGCATCCCTGGTATCTCAGTGCTTGAGAATTCAAGCTTTCCAACCTTTCCTGCAATTGATCCATTGCGGCTTACTGTAGGCTTTTGGAAGCTTGGTTTATCAGGTTACGAAGCAGATGAAATCTTATACAGGGATTATGGAATCATCTGTGAACTTGTTGGGAATAAATGTATCACTTATGCGCTTAATCTTGGAACTCGCAGGGACCATGTCCAAAGGCTTTTATTGGGAATAAAGCATCTAGCTGCATCATATTCATCCATTAAACAATCTGAAGAGAGAGTGCTTACTAGTCATGCACCCTTTGATGATATAATCATGAGTTTGATCCCTAGAGATGCCTTTTTTGCAAATAAAAGAAAAGTAACAGTGAAGGAGAGCCTTGGTGAGGTTTCAGGGGAGCTTATATGTCCATACCCTCCGGGCATACCAGTATTGATCCCTGGTGAGGTTATTACTGAAAAAGCTGTTGATTATCTACTCCATGTTAAGAGTAAAGGTGCTGATATTAGTGGAGCATCTGATCCCTTACTTTCTTCTATAGTTGTTTGCAATGTATAG 1710 0.4304 MASLSLALPSNPKVPKWFSPFHCSNFTNNSSFRPSPTVPLHSSQGRSIALPANGQDESLGRVNTASITNDDVLCSNSLVLQKNDLPPLVSALKASALQNTASFHFPGHNRGNAAPASMARLIGIRPYVHDLPELPELDNLFCPQGPIFEAQREAAKLFGSSETWFLVGGTTCGIQAAIMATCSPGESLILPRNCHLSAISAMVLSGAVPKYIIPDYKNDWDIAGGVTPSQVLKAIQELEMEGKKPAAVFITSPTYHGICSDLSEISELCHSRKIPLIVDEAHGAHLGFHSELPNSALQQGADLTVQSTHKVLCSLTQSSMLHMSGNTVDKEKISRCLQTLQTTSPSYLLLASLDAARAQLSESPDIVFNQAIKLAYEAKCQLKRIPGISVLENSSFPTFPAIDPLRLTVGFWKLGLSGYEADEILYRDYGIICELVGNKCITYALNLGTRRDHVQRLLLGIKHLAASYSSIKQSEERVLTSHAPFDDIIMSLIPRDAFFANKRKVTVKESLGEVSGELICPYPPGIPVLIPGEVITEKAVDYLLHVKSKGADISGASDPLLSSIVVCNV* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00629 569 CDD Orn_deC_like 87 379 IPR000310 GO:0003824
Rops3g00629 569 PANTHER ARGININE DECARBOXYLASE 60 568 - -
Rops3g00629 569 SUPERFAMILY PLP-dependent transferases 86 464 IPR015424 -
Rops3g00629 569 Pfam Orn/Lys/Arg decarboxylase, major domain 86 388 IPR000310 GO:0003824
Rops3g00629 569 Gene3D - 86 365 IPR015421 GO:0003824
Rops3g00629 569 Gene3D - 468 564 - -
Rops3g00629 569 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 501 549 IPR008286 GO:0003824
Rops3g00629 569 SUPERFAMILY Ornithine decarboxylase C-terminal domain 424 567 IPR036633 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00629 - - gmx:100819143 926.776