Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00628 ATGAACATGATGATAGCCTCCAACTCCAATTCCATTACACTTGGAGTTGGTTCATTCACAACTTGCCCACCAGTCACTAGAACTCAAACCTGCCGTAGTCACATTCATGTTCATGTTTCCATTCTTGCCAATCCAAAAGCAAAATCAAAAGGCACTTTTTCTCTCAGTCTCAGTCTTTCCAGGAGGAGGAGCTTGGATATTCTCTCCAGTCCTACTGGGACAACTCTCAGACATCTCAATACGCCAATTTCAGCTCTTAATTCAGGTTTAGAAGCATCAATTACAGATTCCAACGAAAATTCTGCCGCTTTAACAAATGCTAAAATAGTTGTAGAATCCGGAGATGAAAATAAGATACAACTAAGAGTGGACTTGACTGGTGATCAAACGCAAAAAGTATTTGACCGGATCCTCATAGACCTAGGTCGTACTGCCCCACCAGTTCCTGGATTTCGCAGGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAAGACTTCCTTGTCCAGATGCTTGGGGAAGAACGAGTCACTAAGTTTGTAATACAAGAAATACTCAACTCTACCATGGCTGATTATGCGAGAAAGGAAAACTTGGATGTGAAGAACAGGAAGATAAGCACCACTCAAACGGAAGAAGAACTCAAAAAATCATTCACACCAGGAAATGAATTTGGCTTCAATGTTATAATTGAGCCTGAAAATTCATAA 708 0.4054 MNMMIASNSNSITLGVGSFTTCPPVTRTQTCRSHIHVHVSILANPKAKSKGTFSLSLSLSRRRSLDILSSPTGTTLRHLNTPISALNSGLEASITDSNENSAALTNAKIVVESGDENKIQLRVDLTGDQTQKVFDRILIDLGRTAPPVPGFRRQKGGKSSKIPKDFLVQMLGEERVTKFVIQEILNSTMADYARKENLDVKNRKISTTQTEEELKKSFTPGNEFGFNVIIEPENS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00628 235 Pfam Bacterial trigger factor protein (TF) 108 227 IPR008881 GO:0006457|GO:0015031
Rops3g00628 235 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 22 232 IPR005215 GO:0015031
Rops3g00628 235 FunFam Trigger factor 107 233 - -
Rops3g00628 235 SUPERFAMILY Trigger factor ribosome-binding domain 108 228 IPR036611 GO:0006457|GO:0015031
Rops3g00628 235 Gene3D - 109 232 IPR036611 GO:0006457|GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00628 - - vum:124823143 311.997