Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00617 ATGGCTTCACTTCTGAAAATACTGCGGCCTGGTGTGCCTTCAGTTCATGATGATGGTGATGGTGATTACAGCTTTGAGTACTCCTTTGCAGAGGAGTACAAGGGCCCTCCTCTCAGTTACTCTATCCCTGAAGCATCTCCTTTCAACCTTGACCAAATCCCTCTTGCCCCTCTTGCTCCTTCTTCCCCTTATTACTCTTCAGTCCCAGTTATCCAACCTTTCAGAAAAACCAATGCAACAAAGCTCAAACTTCATCCAGTTTCTCTTCTGCCTTCAAATTCTCACCCTCCTTCTCTTGAATCATCAAACTCTGGCGTGGAGTTGGAAGTTCCTACCAATTCAGACGCAACAGAATTGGCTTCAAGCTCTAGTCCTTTTTCTTCTGAGATACTTTCAAGCAGAGAAGAGGATGTTGTTGATGATGACCCTTCTAGTCCAAGACATGTCAAACGGCCTTCCCCTGTGACTTTTCGTGATCCTGAGTCAAATGACATGGTAGATATCCATGTGAATTCTGTGAGACCACATGCTGTGAGACCTGGGAAGAAAGGCACGTGCTATCGATGCCTTAAAGGGAATCGTCTAACTCAGAGAGAGGTTTGCATTGTTTGCAGTGCAAAGTATTGTCGAAACTGTGTCCTTAGAGCAATGGGGTCAATGCCTGAAGGTAGAAAATGTGTTACTTGCATTGGTTATAGAATTGATGAGAGCAAGCGTGGAAAACTTGGGAAATTTTCTAGGATGCTCAAACACTTGTTATCTGAGTTGGAAGTGAAACAAACCAGGCAAGCTGAAAAGTTTTGTGAAGCAAATCAAATACCAGCAGAGCATGTTTGTGTGAATAGAGAACCTCTTGATTGGGATCAACTCATGTTACTCCTAACCTGTCCAAACCCACCAAAAGGATTGAAACCGGGTTTCTATTGGTATGATAAAGCATCTGGCTTTTGGGGAAAGGAAGGTCAACGGCCATGTCAAATTATCAGTCCCCAGTTGGAGATTGGGGGTCACTTGCAGAGAGACGCAAGTGGTGGAAAGACAAATGTAACTATAAATGGTAGAGAGATTACTAAAGAAGAGCTTTGGATATTGAAGTTGGCAGGAGTGGCGTGTGAAGGAACAACAGACTTTTGGGTGAGTCCTGATGGATCATACATGGAAGTGGGACAGAAGAATGTCAAGGGGCATATGTGGGAAAAGCGTAGAGCTAAGCTAGCTTATGCAATTCTGTCACTGCCAGTTCCTAGAAGCTCTGTGATTCATTCTGGTGAAGGAGTAAATGGAGTTAGCCAATACAACATTCAACAGAAAATGCTTCACAAATTTCTACTTGTGGGTTCTTACAAGTCTGGAACATGTACTATATTTAAACAGGCCAAGCTTCTGTATAATGTTCCTTTCTCTGAAAATGAACGCCAAAATATCAAGTTGGTAATCCAAAGCAACTTGTATAGGTACCTTGGTATACTGCTGGAGGCAAGAGAAACTTTTGAAGAGAGTTTGTTCGAGAACAGGAACAGACAGCATGTTGATGAATCAAATTCATCAGGGAACACTGGTGAGATTATTGAGACAACAATGTATTCCATTGGGCCAAGACTGAAAGATTTCTCAGATTGGCTACTCAAATACATGGTGTCAGTTAACTTGGATGCAATATTTCCAGCTGCTACACGTGAATATGCACCACTGGTGGAGGAGCTGTGGAGGGATGCAGCCATTCAGGCCACATACAACAGGAGAAATGAAATCAAAATGCTACCAGGAAGTGCAAGTTATTTTCTAGAGCGGGCTGTAGATATTTCCAAGATAGACTATGAACCCTCAGAAATGGACATCTTGTACACTGAGGGGATAACCTTATCCAACAGCCTTACTTCCATGGAATTTTCATTTCCCATGTCAGGTGATGAGGACTCTTTAGACCCTGAGTATCAACATGATCCTTCTCTAAGGTACCAACTCATCAGAGTAAATCCAAGAAGTCTTGGAGAAAACTGCAAGTGGTTGGACATGTTTGAAGACACAGATGTAGTCTTATTCTCTGTGGCCTTAACTGACTATGATGAGTACACAGTAGACAGTAATGGAGTTGCTACCAACAAAATTTTAGCAGCCAAGCATCTCTTTGAAAACATCATTACTCATAAAGTCTTCAACAAGAAGAAATTCCTTTTAATACTGACCAAATTCGATTTGCTTGAGGAAAATATTGAAAGGGTACCTCTAACAAGATGTGAATGGTTTTGTGACTTTCATCCAGTTATTAGCCACAATCACAATAGAGGTAGTAGTATTAATAAACACAGCAATCACACTTCATTAGCTCTACGTGCTTTTCAATATATTGCTGTGAAGTTCAAGAGATTGTTCCATTCTCTTACTGGCCAAAAGCTGTTTGTTTCACTGGTTACTGGATTGGAACCTGTTACAGTTGATGAAGCTCTTAGATATGCAAGAGAGGTTATGGCATGGGAAAATTGGGACCCCTCTTTCAAAAATGAGAAGTCTGAGATAACTTCCACAACCTTTGAGGAGGCAAGCTACTTATGA 2553 0.4164 MASLLKILRPGVPSVHDDGDGDYSFEYSFAEEYKGPPLSYSIPEASPFNLDQIPLAPLAPSSPYYSSVPVIQPFRKTNATKLKLHPVSLLPSNSHPPSLESSNSGVELEVPTNSDATELASSSSPFSSEILSSREEDVVDDDPSSPRHVKRPSPVTFRDPESNDMVDIHVNSVRPHAVRPGKKGTCYRCLKGNRLTQREVCIVCSAKYCRNCVLRAMGSMPEGRKCVTCIGYRIDESKRGKLGKFSRMLKHLLSELEVKQTRQAEKFCEANQIPAEHVCVNREPLDWDQLMLLLTCPNPPKGLKPGFYWYDKASGFWGKEGQRPCQIISPQLEIGGHLQRDASGGKTNVTINGREITKEELWILKLAGVACEGTTDFWVSPDGSYMEVGQKNVKGHMWEKRRAKLAYAILSLPVPRSSVIHSGEGVNGVSQYNIQQKMLHKFLLVGSYKSGTCTIFKQAKLLYNVPFSENERQNIKLVIQSNLYRYLGILLEARETFEESLFENRNRQHVDESNSSGNTGEIIETTMYSIGPRLKDFSDWLLKYMVSVNLDAIFPAATREYAPLVEELWRDAAIQATYNRRNEIKMLPGSASYFLERAVDISKIDYEPSEMDILYTEGITLSNSLTSMEFSFPMSGDEDSLDPEYQHDPSLRYQLIRVNPRSLGENCKWLDMFEDTDVVLFSVALTDYDEYTVDSNGVATNKILAAKHLFENIITHKVFNKKKFLLILTKFDLLEENIERVPLTRCEWFCDFHPVISHNHNRGSSINKHSNHTSLALRAFQYIAVKFKRLFHSLTGQKLFVSLVTGLEPVTVDEALRYAREVMAWENWDPSFKNEKSEITSTTFEEASYL* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00617 850 Gene3D - 613 831 IPR027417 -
Rops3g00617 850 Pfam G-protein alpha subunit 437 821 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops3g00617 850 Gene3D - 468 612 IPR011025 GO:0007165
Rops3g00617 850 PRINTS Alpha G protein (transducin) signature 676 704 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops3g00617 850 PRINTS Alpha G protein (transducin) signature 724 733 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops3g00617 850 PRINTS Alpha G protein (transducin) signature 441 456 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops3g00617 850 PRINTS Alpha G protein (transducin) signature 606 628 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops3g00617 850 SMART galpha_1 429 807 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops3g00617 850 FunFam Guanine nucleotide-binding protein subunit alpha 644 768 - -
Rops3g00617 850 FunFam Extra-large guanine nucleotide-binding protein 3 468 617 - -
Rops3g00617 850 MobiDBLite consensus disorder prediction 133 162 - -
Rops3g00617 850 PANTHER OS01G0977800 PROTEIN 17 350 - -
Rops3g00617 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 440 827 IPR027417 -
Rops3g00617 850 MobiDBLite consensus disorder prediction 91 131 - -
Rops3g00617 850 ProSiteProfiles G-alpha domain profile. 438 838 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops3g00617 850 SUPERFAMILY Transducin (alpha subunit), insertion domain 467 616 IPR011025 GO:0007165
Rops3g00617 850 MobiDBLite consensus disorder prediction 87 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00617 Rops-Chr3 7683198 7689192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00617 - - gmx:100791124 1238.02