Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00609 ATGCTTGAGGTATACAGTGTGAAGGTGGAGGAGGCAAGGCCGGCAACTGATGAAAAGCCATCAGCAGGTCCTGTTTACAGATGCATTTATGCCAAAGATGGTCTTTTGGAGTTGCCTTCTCATTTACAATCTCCATGGGACTTTTTCAGGGACTGTACTACCAGGTGCCCCAGCAATCCAATGCTGGGTCGGCGTCAAAAAACCGATTCAGGGGTGGGTCCCTATCAATGGCTCACATATCAGGAGGCTTATGATGCTGCCATCAGAATGGGTTCAGCCATGAGGAGCCGTGGTGTCAATCCTGGAGACCGTTGTGGCATATATGGATCCAACTGCCCCGAATGGATAATTGCAATGCAGGCTTGTAATAGCTATGCAGTAACATATGTCCCATTATATGACACCCTCGGTCCTAATGCTGTGGAGTTTATCATAAACCATGCTGAGGTTTCAATAGCATTTGTACAGGATACCAAGATTCCTTCTATTTTGTCATGTCTTGATCGATGTTCAAGTCTTAAAACTATTGTGAGTTTCGGTAATGTTTCAAGCACACAAAAGAAGGAAGCTGAGGAACTTGGAGCATCCTGCTTCTCGTGGGGAGAGTTTCTTCAGTTGGGAAATCTGGATTGGGATCAACCATTAAAAAAGAAGACTAACATCTGCACAATCATGTACACAAGTGGAACAACAGGCGAACCCAAAGGTGTCATTATTAAGAATGAGGCTTTCATGGCCCAAGTGTTGTCTATCGACCAAATACTGCTTCTAACTGACAGAGTGGCAACAGAAGACGATGTGTACTTTTCTTTTCTTCCTCTTGCTCATGTATATGACCAGATAATAGAGACCTATTGCATCTACAAAGGCTCCTCAATTGGATTTTGGCAAGGAGATGTCAAATTCTTAATGGAAGATGTTCAGGCGCTGAAACCAACTTTATTTTGTGGTGTTCCTAGAGTTTATGACCGTGTTTATGCTGGTATAAATAGCAAAATTTCATCTGGAGGAGCACTGCAAAATACATTGTTTCAATTTGCATATAACTACAAGTTGGGATATCTCAAGAAGGGTCTTCCACAAGACAAAGCAGCACCTCTGTTTGACAGGCTTGTATTTGATAAGATAAAACAAGCATTAGGTGGACGAGTTCGTCTCCTGTTATCAGGAGCTGCTCCTTTGCCTAGGCACGTGGAGGAGTTTTTGAGAGTCACTTTTGGATCCAACCTGGCACAAGGATATGGTCTTACTGAAAGTTGTGGTGGGTGTTTCACTGCAATAAGCAATGTGTTTTCTATGATGGGAACGGTTGGAGTCCCCATGACAACCATTGAGGCCAGGCTTGAATCTGTTCCAGAGATGGGATATGATGCACTTTCCAGTGAAGCCCGTGGAGAAATTTGCCTGAGAGGGAATACCTTGTTCTCTGGTTACCATAAACGCCAAGATCTTACTGAAGAGGTCCAGGTTGATGGTTGGTTTCATACAGGTGACATTGGAGAATGGCAGCCTAATGGAGCCATGAAAATTATTGACAGAAAAAAGAATATCTTTAAATTGTCTCAAGGAGAATATGTTGCCGTGGAGAGTATTGAAAACAAGTATTTGCACTGCCCTCTTATAACATCGATTTGGGTCTATGGAAACAGTTTTGAGTCTTTCTTGGTGGCAGTGGTGGTCCCTGAAAGAAAGGCCCTTGAGGATTGGGCAGTGAAGCATGATTTGAGTGATGATTTTAAATCTTTATGTGAAAACCTTAAAGCAAGAAAATACATTTTGGATGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAAGATTTGAGCTGCTAAAAGCAGTTCATCTGGAACCGGTTCCCTTTGACATGGAGAGAGATCTAATAACTCCAACATTCAAATTGAAGAGACCGCAATTGCTAAAGCACTATAAGGATTGTATTGATCAACTATACAAGGATGCGAAGGGAACAATGGTGTGA 1980 0.4263 MLEVYSVKVEEARPATDEKPSAGPVYRCIYAKDGLLELPSHLQSPWDFFRDCTTRCPSNPMLGRRQKTDSGVGPYQWLTYQEAYDAAIRMGSAMRSRGVNPGDRCGIYGSNCPEWIIAMQACNSYAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQDTKIPSILSCLDRCSSLKTIVSFGNVSSTQKKEAEELGASCFSWGEFLQLGNLDWDQPLKKKTNICTIMYTSGTTGEPKGVIIKNEAFMAQVLSIDQILLLTDRVATEDDVYFSFLPLAHVYDQIIETYCIYKGSSIGFWQGDVKFLMEDVQALKPTLFCGVPRVYDRVYAGINSKISSGGALQNTLFQFAYNYKLGYLKKGLPQDKAAPLFDRLVFDKIKQALGGRVRLLLSGAAPLPRHVEEFLRVTFGSNLAQGYGLTESCGGCFTAISNVFSMMGTVGVPMTTIEARLESVPEMGYDALSSEARGEICLRGNTLFSGYHKRQDLTEEVQVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVESIENKYLHCPLITSIWVYGNSFESFLVAVVVPERKALEDWAVKHDLSDDFKSLCENLKARKYILDELNSTGQKHQLRRFELLKAVHLEPVPFDMERDLITPTFKLKRPQLLKHYKDCIDQLYKDAKGTMV* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00609 659 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 651 - -
Rops3g00609 659 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Rops3g00609 659 Pfam AMP-binding enzyme 73 521 IPR000873 -
Rops3g00609 659 Pfam AMP-binding enzyme C-terminal domain 531 572 IPR025110 -
Rops3g00609 659 CDD LC-FACS_euk 73 652 IPR045311 GO:0004467|GO:0006631
Rops3g00609 659 SUPERFAMILY Acetyl-CoA synthetase-like 39 652 - -
Rops3g00609 659 Gene3D - 35 513 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00609 Rops-Chr3 7611524 7617188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00609 5 655 Acyl Lipid Metabolism Gene Families AT1G64400 55.810 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00609 K01897 - gmx:100790068 1236.86