Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00602 ATGAGCACCCTGAATGGCAGAGGTTTCACAGAAGAGCAAGAAGCTCTGGTGGTGAAGTCCTGGAATGTAATGAAGAAGAACTCTGCAGAGCTGAGTCTCAAGTTTTTCTTGAAAATATTTGAGATTGCTCCATCAGCTCAGAAGTTGTTCTCATTCTTGAGAGACTCAAAGGTTCCTTTGGAGCAAAACCCCAAGCTCAAGCCCCATGCCATGTCTGTCTTTATGATGACCTGTGAATCAGCAGTTCAACTGCGGAAGGCTGGTAAAGTCACCGTGAGGGAATCAAACTTGAAAAAGATAGGTGCTACCCATTTTAAAACCGGTGTGGTAGACGAGCATTTTGAGGTAACAAAGTTCGCACTTTTGGAAACCATAAAAGAAGCAGTACCCGAAATGTGGTCACCAGCGATGAAGAATGCATGGGGAGAAGCTTATGATCAGCTGGTTAATGCCATTAAATCTGAAATGAAACCCTCCTCTTAG 483 0.4389 MSTLNGRGFTEEQEALVVKSWNVMKKNSAELSLKFFLKIFEIAPSAQKLFSFLRDSKVPLEQNPKLKPHAMSVFMMTCESAVQLRKAGKVTVRESNLKKIGATHFKTGVVDEHFEVTKFALLETIKEAVPEMWSPAMKNAWGEAYDQLVNAIKSEMKPSS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00602 160 PANTHER LEGHEMOGLOBIN-RELATED 7 157 IPR001032 GO:0019825|GO:0020037
Rops3g00602 160 Pfam Globin 34 152 IPR000971 GO:0020037
Rops3g00602 160 SUPERFAMILY Globin-like 8 157 IPR009050 -
Rops3g00602 160 CDD class1_nsHb-like 9 157 - -
Rops3g00602 160 Gene3D Globins 8 155 IPR012292 GO:0019825|GO:0020037
Rops3g00602 160 ProSitePatterns Plant hemoglobins signature. 63 74 IPR019824 GO:0019825|GO:0020037
Rops3g00602 160 PRINTS Plant globin signature 63 91 - -
Rops3g00602 160 PRINTS Plant globin signature 10 27 - -
Rops3g00602 160 PRINTS Plant globin signature 128 154 - -
Rops3g00602 160 PRINTS Plant globin signature 35 55 - -
Rops3g00602 160 ProSiteProfiles Globin family profile. 9 157 IPR000971 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00602 Rops-Chr3 7571116 7572563 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00602 - - cam:101500782 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00602 3 7571116 7572563 Rops3g00602 3 7571116 7572563 ECH