Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00601 ATGGAAGTTAGCAAGGAAGAGAACACCAACACCAACACCAACACCAACACCAACACCAACACCAACACCGTGGAGGAGGGCACTGCTTTCACGGAAGAGCAAGAAGCTCTGGTGGTCAAGTCATGGAACGAAATGAAGAAGAACTCTGCAGAGCTCAGTGTCAAGTTTTTCATGAAAATACTTGAGATTGCTCCACCAGCTCAGCAAATGTTCTCATTCTTGAGAGATTCAAAAGTCCCTCTGGAGCAGAACCCCAAGCTCAAGCCCCATGCCATGTCTGTCTTCCTTATGACATGTGAATCTGCAGTTCAACTGCGGAAGGCTGGTAAAGTCACCGTGAGAGAATCAAGCTTGAAAAAGCTAGGTGCTACTCATTTCAAAAGCGGTGTAAAAGATGAGCATTTTGAGGTCACAAAGCTCGCGCTCTTGGATACCATAAAAGAAGCAGTACCTGAAATGTGGTCACCAGCCATGAAGAATGCATGGGAAGTAGCTCATGATCAGCTGGCAAATGCCATCAAATCTGAAATGAAATCAGCTGCCAATTATGCCATCGAATCTGAAGTAAAATCAGCTGGCAATTATGCCATCAAATCTGAAATAAAATCAGCTGGCAATGATGCCATCAAATCTGAAATGAAACCTTCCTCTTAG 654 0.4434 MEVSKEENTNTNTNTNTNTNTNTVEEGTAFTEEQEALVVKSWNEMKKNSAELSVKFFMKILEIAPPAQQMFSFLRDSKVPLEQNPKLKPHAMSVFLMTCESAVQLRKAGKVTVRESSLKKLGATHFKSGVKDEHFEVTKLALLDTIKEAVPEMWSPAMKNAWEVAHDQLANAIKSEMKSAANYAIESEVKSAGNYAIKSEIKSAGNDAIKSEMKPSS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00601 217 PRINTS Plant globin signature 31 48 - -
Rops3g00601 217 PRINTS Plant globin signature 56 76 - -
Rops3g00601 217 PRINTS Plant globin signature 84 112 - -
Rops3g00601 217 PRINTS Plant globin signature 149 175 - -
Rops3g00601 217 ProSiteProfiles Globin family profile. 28 178 IPR000971 GO:0020037
Rops3g00601 217 ProSitePatterns Plant hemoglobins signature. 84 95 IPR019824 GO:0019825|GO:0020037
Rops3g00601 217 Gene3D Globins 28 176 IPR012292 GO:0019825|GO:0020037
Rops3g00601 217 MobiDBLite consensus disorder prediction 1 22 - -
Rops3g00601 217 SUPERFAMILY Globin-like 24 178 IPR009050 -
Rops3g00601 217 Pfam Globin 55 173 IPR000971 GO:0020037
Rops3g00601 217 PANTHER LEGHEMOGLOBIN-RELATED 28 181 IPR001032 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00601 Rops-Chr3 7539017 7540355 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00601 - - gmx:100809295 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00601 3 7539017 7540355 Rops3g00601 3 7539017 7540355 ECH