Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00591 ATGAAGTCTTTGGGTACCATGAACTCAACAAATCCATGTTTTCCCAAAACCCATTTCCACAAAGTTCCTATCTTTAACACCTTCTTCAAATTCAAGCCATTCCCATGCAACAACCATGGTGCAAGGAGAGCTCATCCCCTATCATTCACCATCAACTGCAAGCTGAAAAGCTCTCAAGATATCAAAAACAAAGGGAAAAGCGTGTCCCAGAAGATTGTATTATCAGAAGCTTCCCCTCCACCACTAACAGAGGATGGTGACATCAATGGTGGTAGTGGCACTGGTGATGTTCCAGAAGGTTCAAAGAACAAGGGAGGCCCTTCTAGGCTGGCCAAGAAGTTGAGTAAAAAGATGTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGGGAAATGATCACCATTGCTTCTTTAATGGCTTTGGGCACTTTTATTGATCAAGGTGAGGCCCCTGACTATTATTTCCAGAAGTACCCTGAAGATCATCCCGTGTTGGGATTTTTTACTTGGAGATGGGTTCTCACCCTTGGTTTTGATCACATGTTTTCATCCCCTATATTTCTTGGAATGTTGGCTCTCCTTGGTGCATCCCTTATGGCCTGCACTTACACTACACAGCTCCCACTCATCAAGGTCTCGAGAAGATGGTCATTTTTGCACTCTGCTGAGTCTATACGCAAGCAGGAATTTTCAGAATCTTTGCCAAGAGCATCAATCCAAGATGTTGGTACTCTATTGATGGGAGCTGGATACGAGGTATTCTTGAAAGGGCCATCTCTGTATGCTTTTCGAGGGCTTGCAGGTCGGCTGGCCCCTGTTGGAGTCCATATATCACTGCTGTTAATAATGGCTGGAGGAACTCTTAGTGCTGCTGGGAGCTTCAGAGGCTCAGTCACTGTTCCCCAGGGGCTGAATTTTGTTGTAGGAGATGTTCTGGGTCCTATTGGCTTTCTCTCCTCTCCTACTGAGGCTTTTAATACAGAGGTTCATATCAATAGATTCTACATGGATTATTATGATAGTGGAGAGGTTTCTCAGTTCCACACCGATCTTTCCCTCTTTGACATGGATGGGAAAGAAGTAATGAGGAAAACAATTAGTGTAAATGATCCTTTAAGATATGGTGGTATCACCATATACCAGACAGATTGGAGTCTTTCGACCCTGCAAATTCTTAAGGACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTACAGATCAATGGAGATAAGAAACTTTTTGGTTCTTTTCTACCTATTGGAGATATTAACTCTCCTGATGTTAAGGGAATATCTATGCTTGCTCGTGATCTGCAGTCAATTGTCCTTTATGATAAGGAAGGCAAATTTGCAGGAGTTAGACGACCTAATTCGCAGCTCCCTATCAATATAGATGGCACAGAAATTGTCATTGTTGATGCAATAGGAAGTAGTGGCTTGGACTTGAAGACTGACCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGCTCACTACTTGCATCAGCTATTTATCTCATTCACAGATATGGGCCTTACAAGATGGGACAGCAGTCATTATTGGAGGGAAGACCAACAGAGCAAAGATGGAGTTTCCAGAGGAGATGAACCGCTTGCTTGATAAGGTCCCTGAAATAGTTGAATCATCTCTACCTAAGGAAGCTGAGAGCGTTAGTGGTTAG 1692 0.4332 MKSLGTMNSTNPCFPKTHFHKVPIFNTFFKFKPFPCNNHGARRAHPLSFTINCKLKSSQDIKNKGKSVSQKIVLSEASPPPLTEDGDINGGSGTGDVPEGSKNKGGPSRLAKKLSKKMLQILSNLPLAIGEMITIASLMALGTFIDQGEAPDYYFQKYPEDHPVLGFFTWRWVLTLGFDHMFSSPIFLGMLALLGASLMACTYTTQLPLIKVSRRWSFLHSAESIRKQEFSESLPRASIQDVGTLLMGAGYEVFLKGPSLYAFRGLAGRLAPVGVHISLLLIMAGGTLSAAGSFRGSVTVPQGLNFVVGDVLGPIGFLSSPTEAFNTEVHINRFYMDYYDSGEVSQFHTDLSLFDMDGKEVMRKTISVNDPLRYGGITIYQTDWSLSTLQILKDNEGPYNLAMAPLQINGDKKLFGSFLPIGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSQLPINIDGTEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTAVIIGGKTNRAKMEFPEEMNRLLDKVPEIVESSLPKEAESVSG* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00591 563 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 115 544 IPR023494 -
Rops3g00591 563 Pfam ResB-like family 428 539 IPR007816 -
Rops3g00591 563 Pfam ResB-like family 127 389 IPR007816 -
Rops3g00591 563 MobiDBLite consensus disorder prediction 74 109 - -
Rops3g00591 563 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 64 553 IPR023494 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00591 28 553 Miscellaneous Gene Families AT1G49380 69.565 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00591 K07399 - gmx:100807003 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00591 3 7456856 7465131 Rops3g00591 3 7456856 7465131 ECH