Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00588 ATGACCGAGGCTGGTGATTTAGACGCGTGCTCATTGTTGGTTTTTACAGTGGGATGGTTCCGTGATATTGGAAGTGAGTCTTCTTCTCTTGCCCCAAACCAACAAGATTCTGCATTCTACTTCCGCCTCAAGTTCTTTGCTTTGCTTTATCTCGCTTTCCTCTCCTTTTTACAAAACAGAAAGAAAAACCATCATCCTTTAGCTCTCAATCAAATTTCATTGTCGTTGTCTGGGATTTCTTATCTTCTTCCATCGTTTTCAAAGATCATTTCAATTGAAAGAATGGGAAGTCATATGAGCAAGAAGATCCCTGAAACTTCATCTGCTATTAACCTCAGTACTGAATTGCACTATAGAACTGAGCTCAGCTCTTATGAGGCTGCTTGCAAGGTTGATACTGATTTGCAATCCTTTGACACCACACTTCACGCTAGAACAAATCAGGTTATCAATACTCTTGCGGTTGGTGTTGAAGCTCGCGCCCTTTCTTTTGATTCTCTAAAACAAGTCACAGAATGTCTTCTTGAGATGAATCAGGAAGTTGTCAAGGTAATCTTGGACTGCAAGAAAGATATATGGAAGAGCCAAGAACTGTTTGAACTTGTGGAGGAATACTTTGAGAACAGTTTGCAAACTTTGGATTTCTGCACTGCATTGGAGAAGTGCCTAAAGAGAGCAAGGGACAGCCAGTTGCTTATTCTTGTTGCTCTTCAACAGTTTGAGGAGGAATCACAATCAGCGTTGGGAGATAATCGCTATGTGAGGACATTACAAGAATTGAAGAATTTCAAGGCAGCTGGTGACCCTTTCACTGAAGAATTCTTCCAAAATTTTCAATCTGTTTATAAGCAGCAGATACTCATGCTTGAAAAGTTGCAAGTTAGAAAGAACAAGCTTGATAAGAAACTAAAATGCATTCATTCTTGGAGGAAGGTATCAAGTATGATATTTGTGGCTACATTTGCTGCTGTTTTGATTTGCTCACTTGTTGCAGCAGCTATTGCAGCTCCACCTGTTGCTGCCGCTTTAGCTGCTGCTACCTCAATCCCAATTGGTTCAATGGGAAAATGGATTGACTCTCTTTGGAAGAACTATGAAATTGCATTGAAAGGGCAGAAGGAAGTGATTAGCTCAATGCAGGCCGGTACCTATGTTGCTATAAAGGACTTGGACAACATTCGTATTCTCATTGATAGGCTTGAAATTGAGATTGAATCTCTACTGCATAATGTGGATTTTGCCATTGAAGAAGAAGCTGTCAAAGTTGCAATAGAGGAGATCAAGAAGAAGCTGGGAGTGTTTATGAAGAATGTTGAAGATTTAGGAGTTCAAGCTGATATGTGTAGCCGTGACATTAGGAGGGCAAGGACTGTGGTTCTGCAAAGAATCATAAAGCATCCTCACAATTGA 1410 0.4043 MTEAGDLDACSLLVFTVGWFRDIGSESSSLAPNQQDSAFYFRLKFFALLYLAFLSFLQNRKKNHHPLALNQISLSLSGISYLLPSFSKIISIERMGSHMSKKIPETSSAINLSTELHYRTELSSYEAACKVDTDLQSFDTTLHARTNQVINTLAVGVEARALSFDSLKQVTECLLEMNQEVVKVILDCKKDIWKSQELFELVEEYFENSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEESQSALGDNRYVRTLQELKNFKAAGDPFTEEFFQNFQSVYKQQILMLEKLQVRKNKLDKKLKCIHSWRKVSSMIFVATFAAVLICSLVAAAIAAPPVAAALAAATSIPIGSMGKWIDSLWKNYEIALKGQKEVISSMQAGTYVAIKDLDNIRILIDRLEIEIESLLHNVDFAIEEEAVKVAIEEIKKKLGVFMKNVEDLGVQADMCSRDIRRARTVVLQRIIKHPHN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00588 469 PANTHER UPF0496 PROTEIN 3-RELATED 118 465 IPR007749 -
Rops3g00588 469 Coils Coil 390 417 - -
Rops3g00588 469 Pfam Protein of unknown function (DUF677) 135 463 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00588 Rops-Chr3 7413993 7420431 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00588 - - gmx:100804335 603.594