Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00585 ATGATTGGGCGCAGAGATAGAGAAGGACCCTTGATGAGGAACAACACGCATTCTCTACTCAAATCAAGGGTCATAACCGCCGTTGCAATTGGGGTCCTTGTTGGATGCATCTTCGCTTTCTTGTTCCCTAATGGGTTCTTCGTTTCTGACTCTAATCGCCATCTCCCTCTCGCTGGATCCAAGACCCAGGAAAATTCAGCTGGATGTGAATCCTCGGATCGGGTCAACATGTTGAAATCAGAGTTTGTGGCAGTATCAGAGAAAAATGCTGAGCTGAAGAAACAGGTGAGGGAATTGACTGAAAGGCTTCGGCTTGCAGAGCAAGGTAAAGATCAGGCTCAAAAGCAGTTTCTCGTGTTGGGTAAACAGCCTAAAGCTGGACCTTTTGGTACTGTCAAGGGATTAAGAACCAATCCTACTGTTGTACCTGATGAATCCGTGAACCCAAGATTGGCAAAGATATTGGAGAAAGTTGCAGTTAAACGAGAGCTTATAGTTGCACTTGCAAATGCCAATGTGAAGGAGATGCTGGAGGTCTGGTTCACCAATATCAAGAGAGTGGGTATACCCAATTATCTTGTTGTTGCTTTAGATGATGAGATTGCAAAGTTCTGTGAATCAAATCAAGTCCCAGTTTACAAGAGAGACCCAGATGATGGTGTTGATTCGATTGGAAAAACAGGAGGGAACCATGCTGTCTCTGGGCTTAAATTTCGTATTCTAAGAGAGTTTTTGCAGTTGGGATATAGTGTTCTTCTATCAGATGTTGACATTGTATATTTGCAGAATCCTTTTCATTATCTATACCGGGATTCAGATGTGGAGTCCATGAGTGATGGTCATAATAACATGACAGCTTATGGCTATAACGATGTCTTTGATGAACCTGCAATGGGATGGGCTCGATATGCTCATACTATGAGGATATGGGTTTACAACTCTGGTTTCTTCTATATCAGACCAACAATCCCTTCAATTGAGCTTTTGGATCGTGTGGCAACAAGACTTTCCAAGGAGAAAGCTTGGGACCAGGCTGTTTTCAATGAGGAACTATTTTTCCCCTCACATCCTGGTTATGATGGGCTTCATGCTGCCAGAAGAACCATGGATTTCTATCTCTTCATGAACAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTCAGCAAATTGAAACCAGTAATTATTCATGTGAATTACCACCCTGATAAGCTTCCACGAATGAAAGCAGTTGTTGAATATTATGTTAATGGGAAGCAGGATGCTCTCAAACCTTTCCCTGAAGGCTCAGATTGGTAA 1305 0.4276 MIGRRDREGPLMRNNTHSLLKSRVITAVAIGVLVGCIFAFLFPNGFFVSDSNRHLPLAGSKTQENSAGCESSDRVNMLKSEFVAVSEKNAELKKQVRELTERLRLAEQGKDQAQKQFLVLGKQPKAGPFGTVKGLRTNPTVVPDESVNPRLAKILEKVAVKRELIVALANANVKEMLEVWFTNIKRVGIPNYLVVALDDEIAKFCESNQVPVYKRDPDDGVDSIGKTGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFHYLYRDSDVESMSDGHNNMTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFFPSHPGYDGLHAARRTMDFYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPDKLPRMKAVVEYYVNGKQDALKPFPEGSDW* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00585 434 SUPERFAMILY Nucleotide-diphospho-sugar transferases 165 371 IPR029044 -
Rops3g00585 434 Pfam Nucleotide-diphospho-sugar transferase 189 407 IPR005069 -
Rops3g00585 434 PANTHER ARABINOSYLTRANSFERASE RRA3 1 433 IPR044290 GO:0016757|GO:0080147
Rops3g00585 434 Coils Coil 75 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00585 Rops-Chr3 7318016 7320706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00585 K20783 - gmx:100804189 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00585 3 7318016 7320706 Rops3g00585 3 7318016 7320706 ECH