Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00580 ATGGGTGAAAAATTTATATCTTGGATCCTCCTTCTTCATCTGCTAATAATCATGAGTTCCCATGGATGCAGAGCCAGGAAATTGGCTGGAACAGAAAACAAACTCTTGGATATTGCACTGGAAGATGAAGGTGATGCTAATTTCCAAGATGATCATCAAACAGCGCACATACATCATAATGGACATGGTCTCTCTACGACCCATAAGGATCATATGGACCCTTCTCTAATGGTGTTCTTCACCTTGAAAGATTTGAAGGTTGGTAAAAGAATGCCCATTTATTTTCCCAAGAGGGACCCTGCAACCTCCCCTCATCTATGGCCAAGAGAAGAAGCTGATTCAGTTCCTTTCTCACTGAACCAGCTGCCAAACCTTCTCAAGCACTTCTCTTTCTCTCCAGCTTCTCCCCAAGCCAAAGCCATGGAAGATACCCTGAGGGAATGTGAAAGCAAACCCATCAAAGGAGAGGTCAAGTTATGTGCTACCTCTTTAGAATCTATGCTTGACTTTACTCATAGCATACTTGGGTTCGCATCTGATCTCCAAGTTTTTGCCACTTTACACAAAACCAAATCTAGTGTCACCTTCCAGAACTACACAATCTTAGGAAGCATCATGGAAATCCCAGCTCCTACGATGGTAGCGTGTCATACCATGCCTTACCCTTATGCTATTTTCTACTGCCACAGCCAAGAAAGTGAGAACAGGATATATAAAATCTCACTTGCCGGTGACAACGGGGATATGGTGGAAGCTATGGTTGTTTGTCACTTAGATACCTCCAAATGGGGTCCTGGCCATGTTTCATTTCAAGTACTTGGGGTTAAGCCTGGAACATCTTCTGTATGCCACTTTTTCCCCGTAGATAATCTCATCTGGGTTCCTAAATTGCAAGCCCAAGGTCTTTCAACCATGTGA 918 0.4346 MGEKFISWILLLHLLIIMSSHGCRARKLAGTENKLLDIALEDEGDANFQDDHQTAHIHHNGHGLSTTHKDHMDPSLMVFFTLKDLKVGKRMPIYFPKRDPATSPHLWPREEADSVPFSLNQLPNLLKHFSFSPASPQAKAMEDTLRECESKPIKGEVKLCATSLESMLDFTHSILGFASDLQVFATLHKTKSSVTFQNYTILGSIMEIPAPTMVACHTMPYPYAIFYCHSQESENRIYKISLAGDNGDMVEAMVVCHLDTSKWGPGHVSFQVLGVKPGTSSVCHFFPVDNLIWVPKLQAQGLSTM* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00580 305 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 37 295 IPR044816 -
Rops3g00580 305 SMART BURP_2 77 296 IPR004873 -
Rops3g00580 305 Pfam BURP domain 78 295 IPR004873 -
Rops3g00580 305 ProSiteProfiles BURP domain profile. 79 296 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00580 Rops-Chr3 7209960 7211133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00580 - - gmx:100800777 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00580 3 7209960 7211133 Rops3g00580 3 7209960 7211133 ECH