Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00572 ATGGAGGAGAAACTCATACAGCGATTGGAATCGGCGGTGTCGCGCTTGGAGGCGCTATCCACCGGATTCCGCCCTGGCGCTTCACCGGCCGGAGGTGCCGACGCTCCCGATGCGTCGCTTGATCCGTCCGTCGTCGCGTTCGCCGATCTGATTGATCAGCATGTCAGTAGGGTTTCCAGTGCGGCCGAGATTATCGGTGGACAGGTGTTGGAGGTCACCAAAATCGTTAAGGAAGCTTTCGCTGTTCAGAAAGAGCTTTTGATTAAGCTCAAATACACTCAGAAGCCTGACCATGCTGGGTTGGCTGAATTTCTGAAACCATTGAATGAAGTGATCATGAAAGCTGCTGCAATGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTGAAGGCTGCTGTTGACAGTCTCTCAGCTCTAGCATGGATTGCATATACAGGGAAGGATTGTGGTATGAGTATGCCCATTGCGCATGTGGAAGAAAGTTGGCAAATGGCTGAATTTTACAGCAACAAGGTGCTTGTAGGGTACAGAAACAAAGACCCAAATCATGTTGAGTGGGCCAAAGCTCTGAAAGAGTTGTATCTACCTGGTTTGAGGGATTATGTCAAGAGCTTTTATCCTTTAGGACCCGTATGGAGTCCAACAGGAAACGTAATTTCTCCATCAAAAGCTCCTGCATCTGTTGCGCCTGCTGCCCCTCCTCCTCCATCCGCTTCTCTCTTTAGTTCTGAATCATCTCGGGCTTCATCTTCTAAGCCAAAAGAGGGGATGTCTGCTGTTTTTCAGCAGATCAGTTCACGAAATGTCACTGCAGGTTTGAAAAAGGTTACGGCTGATATGAAGACTAAGAATCGCTCGGATAGAACTGGAATTGTTGGAAGTGGTGAAAAAGAAAGTCGTGCAGGTTCACCTGCATTTTCCAAAGCAGGTCCTCCGAAGTTAGAACTTCAAATGGGTCGCAGATGGGTTGTTGAGAATCAAATAGAACAGAAAGGCTTGATCATTGAAGATTGTGATTCAAAGCAGTCTGTATATGTTTATGGATGCAAAAACTGTGTGTTGCAAATTCAAGGCAAGGTCAACAATATAACTATCGACAAATGCTCAAAGATCGGAGTTGTATTTAAGGATGTCGTTGCAGCTTGTGAGATTGTAAACTGTAATGGGGTTGAAGTTCAATGCCAGGGTTCAGCTCCTACAATTTCGGTGGACAACACGTCTGGCTGCCAGCTATATCTGAGCAAAGACTCTTTAGGAGCATCCGTATCTTCAGCAAAGTCAAGTGAGATCAATGTATTGGTTCCTGGTGCTGAGCCTGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGGATGGCCATTTTGAAACAACTCCAGCTTCTCACTCTGGAGGTTAA 1419 0.4588 MEEKLIQRLESAVSRLEALSTGFRPGASPAGGADAPDASLDPSVVAFADLIDQHVSRVSSAAEIIGGQVLEVTKIVKEAFAVQKELLIKLKYTQKPDHAGLAEFLKPLNEVIMKAAAMTEGRRSDFFNHLKAAVDSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYSNKVLVGYRNKDPNHVEWAKALKELYLPGLRDYVKSFYPLGPVWSPTGNVISPSKAPASVAPAAPPPPSASLFSSESSRASSSKPKEGMSAVFQQISSRNVTAGLKKVTADMKTKNRSDRTGIVGSGEKESRAGSPAFSKAGPPKLELQMGRRWVVENQIEQKGLIIEDCDSKQSVYVYGCKNCVLQIQGKVNNITIDKCSKIGVVFKDVVAACEIVNCNGVEVQCQGSAPTISVDNTSGCQLYLSKDSLGASVSSAKSSEINVLVPGAEPDGDWVEHSLPQQYIHLFKDGHFETTPASHSGG* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00572 472 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 312 471 IPR036223 -
Rops3g00572 472 Pfam Adenylate cyclase associated (CAP) C terminal 312 469 IPR013912 GO:0003779|GO:0007010
Rops3g00572 472 FunFam Adenylyl cyclase-associated protein 43 218 - -
Rops3g00572 472 MobiDBLite consensus disorder prediction 279 311 - -
Rops3g00572 472 SMART carp 350 387 IPR006599 -
Rops3g00572 472 SMART carp 388 425 IPR006599 -
Rops3g00572 472 MobiDBLite consensus disorder prediction 223 258 - -
Rops3g00572 472 Pfam Adenylate cyclase associated (CAP) N terminal 3 59 IPR013992 GO:0003779|GO:0007010
Rops3g00572 472 Gene3D - 43 218 IPR036222 -
Rops3g00572 472 Gene3D - 311 471 IPR016098 -
Rops3g00572 472 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Rops3g00572 472 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 43 238 IPR036222 -
Rops3g00572 472 MobiDBLite consensus disorder prediction 279 295 - -
Rops3g00572 472 FunFam Adenylyl cyclase-associated protein 311 471 - -
Rops3g00572 472 ProSiteProfiles C-CAP/cofactor C-like domain profile. 312 449 IPR017901 -
Rops3g00572 472 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 2 471 IPR001837 GO:0003779|GO:0007010
Rops3g00572 472 MobiDBLite consensus disorder prediction 239 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00572 Rops-Chr3 7128242 7132791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00572 K17261 - gmx:100793194 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00572 3 7128242 7132791 Rops3g00572 3 7128242 7132791 ECH