Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00570 ATGATTCCCACCGCCGGCGTTCCCAAGAAGAGGCAGCGCACCGTCGCCACCCGCCATTCCTCCTTCGCCGCCGTAACCGTCTCCTCCTCGGATAAAACCCTAACCCAAAACCGTCCCCGCGGCAGCACTACCGGCGACTCACTCTCCTTCAACGACGCCTCCACCGCAGACGTCATCCTCCGCCTCTTCACCGATGCCGTCTCCTCGCCGGAATCCTCCCCTACCGTCGACCTCTCAGATCACCATGTGTACCTCCACTCTCACATCCTCCGCCGCTCCAAATACTTCTCCGCCCTATTATCCGACCGATGGATTGGCCACGTCCACCCTAACCCGCCGGAAAACTCCTCCTCCTCCGACCACGACTTATTCCGCCTCAATCTTGCCGTTCCTCCCAATCCAGGTTCGTTCCAGGCACATCTCACGGTTCTGGAACTTCTCTACACGAACGATTTCACCAACGCCGTCGATAGCGCCTCCACGGCGCTGGATCTGCTCCCGGTGGCGCTGGAATTGCTCTTCGAAGAGTGCGTCCGTTTTTGCGTAGGGTTTCTAGAAGCAGTTCCATGGACAGAGGAAGAAGAAAACAGAGTGGTTAGTTTAATCCCTTTCCTTAGCGAAGAAGAATCAAAAGAACTCATAGCTAGAGTTTCACCGGTGGGAGAAGACGCATGCGAAGCGATGCTTCAAGGTTTGGTCTCATCAGCAATAAACAATCAGAACACAGCGTTCGTAAAAGCGTTTGTTGGGAAAATTCTTAGGGATTTGTCATCTCGTGAAACGGCGAAGAGAGTGTTGGAGAATGCGTTTAGGAAGAGCTTGAAGACGATGAAGGAATCGTTGGAGGAATATTTGAGTCCTGTGTTTAGAGGGGATCATAATGAAACGGAAGCGATTCAGAGGTTGAATTTGCATAAGGCTTCTACAAATGTGAAGCATCTTCTGTGGTTGGTGGAGAGGATGATTGAGCTTAGGGTTGCTGATGTGGCGGTTCGTGAATGGAGTGAGCAAGCTCCTTTCACTGCTGATTTGCAGAGGGCATTTCGTGATGATGCTATGAGGAATATTGTGCCTGGTTTTCCGGCTGTTATTCTGCGGTGCACTTCCAAGCTTGCTCATGGTGTTTGTGCTGGCTCTATTCTCGTTTCTGCCCAGGTGAGAAGGAAGCTCGTGGAAGCTTGGCTTCCCGTTTTGATTGTAAGCAAAGACAATGTAACACCAATGTCACCCAGCCACAAATCGTTATATCTAGAGCTGGAAGAAACATTCTTGCAAATAATCTCCACATTGCCCCTCTCAGATGCGCAAGAGTTGTTGCAGCGGTGCCTCAGCTTTTCAACCCGCAATGTTGAAGATTGTCTTCACTTGGTGACTGCATTCAACACCTGGTTCCGCCGTGCAGCCCAACCCCTCAAACCAGATTCTCTCTTTGATCAGTGA 1440 0.5118 MIPTAGVPKKRQRTVATRHSSFAAVTVSSSDKTLTQNRPRGSTTGDSLSFNDASTADVILRLFTDAVSSPESSPTVDLSDHHVYLHSHILRRSKYFSALLSDRWIGHVHPNPPENSSSSDHDLFRLNLAVPPNPGSFQAHLTVLELLYTNDFTNAVDSASTALDLLPVALELLFEECVRFCVGFLEAVPWTEEEENRVVSLIPFLSEEESKELIARVSPVGEDACEAMLQGLVSSAINNQNTAFVKAFVGKILRDLSSRETAKRVLENAFRKSLKTMKESLEEYLSPVFRGDHNETEAIQRLNLHKASTNVKHLLWLVERMIELRVADVAVREWSEQAPFTADLQRAFRDDAMRNIVPGFPAVILRCTSKLAHGVCAGSILVSAQVRRKLVEAWLPVLIVSKDNVTPMSPSHKSLYLELEETFLQIISTLPLSDAQELLQRCLSFSTRNVEDCLHLVTAFNTWFRRAAQPLKPDSLFDQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00570 479 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 47 468 IPR038920 -
Rops3g00570 479 MobiDBLite consensus disorder prediction 1 49 - -
Rops3g00570 479 MobiDBLite consensus disorder prediction 17 49 - -
Rops3g00570 479 Gene3D Potassium Channel Kv1.1; Chain A 45 217 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00570 Rops-Chr3 7112836 7115517 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00570 - - gmx:100793732 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00570 3 7112836 7115517 Rops3g00570 3 7112836 7115517 ECH