Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00551 ATGGGGAAAGCGAAGGCGAAGGGGAAGCACCGTTTGGACAAGTACTACCACTTAGCCAAAGAACACGGTTACAGATCCAGAGCCTCATGGAAACTCGTCCAACTCAATTCCAAGTTTCGCTTCCTCGAATCCTCACGCGCCGTCCTCGACCTCTGCGCCGCCCCCGGAGGATGGATGCAAGTGGCGGTTCAACGAGTCCCCGTTGACCACCTTGTCATCGGCGTTGACCTCGCACCAATCGCTCCCATTCGTGGCGCCATCGCCATTCAAGAAGACATCACCAAACCCGAATGCAAGTCCAAAATCAAGAAGCTCATGAATGAGCATGGTTATCGCGCCTTCGATGTTATACTTCATGACGGTTCCCCTAACGTCGGTGGTGCTTGGGCTCAAGAAGCCACGAGCCAAAACGCTCTCGTTATCGACGCCGTCAAGTTAGCCACACAGTTCTTAGCCCCCAAGGGTATTTTCGTCACCAAGATTTTCAGGTCGCAGGATTACAGTTCTGTTGTGTATTGCTTGAAGCAGTTGTTTGAAAAGGTCGAGGTGGATAAACCTGCTGCGAGTCGTTCTGAATCTGCTGAGATATATGTTTTGGGGCTTAGGTACAAGGCCCCTGCCAAGATTGATCCGCGCCTTCTTGATTACAAGCATCTCTTTCAGGGATCCGCGCAACCACAGGCTAAGGTGGTGGATGTACTTAGAGATAATAAGCAAAAGAGGCATCGTGATGGCTATGAAGATGGAGTCTCTACTTTAAGGAAGGTGTCTTCAGCTGCAAATTTTATTTGGTCAGATGCTCCTTTGGAGATCCTTGGTTCTGTCACTTCTATAACCTTTACTGATACAGCTGATTTACCAATCAAGGACCATGACTTAACAACTGAAGAGGTAAAATCTCTCTGTGATGATTTGAGGGTTTTGGGGAAGCAAGACTTCAAGCATCTTCTAAAGTGGCGTATTCACATTAGGAAAGCTCTTTCACCTGTTCAAAAGCCTGATGCTACTGCTACAGCAGAGATAGAAAATAAGCATATAGATACGGTGAATGAAGATGATAGATTACTCAATGAAATGGAGGAACTGACATATGCAATGGACCGCAAGAAGAAACATGCAAAAAAGCTTCTCGCAAAAAGAAAAGCTAAGGACAAGGCACGAAAAGCATTAGGGATGCAAATGGACGCAGTAGAAGATGGTTATGTTGATCACGAGTTATTTTCTCTTTCCTCTATCAAGGCTAAGAAGGATCTGGTAGCTGTTGACACCACTGAATATGAAGGTGATGAGGGTGAAGTGGAAGACAGTGAGAATGAAGAAATCAATGAAGGCTCAGAGCATTCGTCCAGTGACTTAGATTCTGATGAAGAACGTAAAAGATACAATGAACAAATGGAAGAGTTACTTGATCAAGCTTATGAGCGGTTTGTGGTCAGAAAGGAAGGAAGTGCAAAGCAGCGGAAGCGTATTAAGAAATCCTATGAAGCAGAGGCCCAACTTTTGGAGGGTGGTGAAGATGAAGACATTGTTCAGTCCAAATATGATTCTGATGAAGATCAGGGCGATCAAGAAGCAAATCCTTTGATGGTGCCACTTGATGACGGTGCAGAGCCCACCCCAGAGGAGATTACGAATAAGTGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTAGAGGAAGGAGACTTTGAGAAGGATGAGAGTGAAGATGAAATGGATATTGATGGGCATAAGGAGAAGCCATCTGTTGCAAAAAAGGTCAAAGAAAATAAAACAACAGGTTCTGCAGAGATAGAAAACCCTCAATCTCAAGCATCTAAGGCAGATGATTTTGAGATCGTTCCTGCGCCTGCTACTGATTCAAGTGATGATTCGTCCTCTGATGATTCGGAGGAAGATGTTGAAACCAAAGCTGAGATATTGGCTTATGCTAAGAAGATGCTGAGGAAAAAGCAACGGGAGCAGATACTAGATGATGCATATAACAAATACATGTTTGATGACGAGGGATTGCCCAAATGGTTTCTAGATGAGGAAAGGAGACACCGCCAACCAATAAAGCCTATCACCAAAGAGGAAATTGCTGCAATGAGAGCACAATTTAAAGAAATTGATGCCCGGCCTGCAAAGAAGGTGGCACAGGCCAAAGCACGCAAGAAGCGTGATGCTATGAGGAAGCTTGAGAAAGTACGTAAGAAGGCCAATGCTATATCAGATCAGACAGAGATATCTGATCGTTCAAAGAGGAAGCAAATTGAACAGCTATATAAAAAGGCTGTTCCGAAGAGGCCTAAAAAAGAATATGTAGTTGCAAAGAAAGGTGTCCAAGTCAAGGCTGGCAAGGGAAAAGTCCTTGTTGATCGCAGGATGAAGAAGGATGCTAGGAAACATGGAATGGGTAAGGCAGGAAAAGGTGGTAAGACGAAGGGTAAGGCTCCGAAGGGTAAAGGATCTTCAAAGGCCTCTGCAAAGAAAGGAAGAAAGGGGAATAAATGA 2493 0.4485 MGKAKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFRFLESSRAVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAIAIQEDITKPECKSKIKKLMNEHGYRAFDVILHDGSPNVGGAWAQEATSQNALVIDAVKLATQFLAPKGIFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLRYKAPAKIDPRLLDYKHLFQGSAQPQAKVVDVLRDNKQKRHRDGYEDGVSTLRKVSSAANFIWSDAPLEILGSVTSITFTDTADLPIKDHDLTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALSPVQKPDATATAEIENKHIDTVNEDDRLLNEMEELTYAMDRKKKHAKKLLAKRKAKDKARKALGMQMDAVEDGYVDHELFSLSSIKAKKDLVAVDTTEYEGDEGEVEDSENEEINEGSEHSSSDLDSDEERKRYNEQMEELLDQAYERFVVRKEGSAKQRKRIKKSYEAEAQLLEGGEDEDIVQSKYDSDEDQGDQEANPLMVPLDDGAEPTPEEITNKWFSQDVFAEAVEEGDFEKDESEDEMDIDGHKEKPSVAKKVKENKTTGSAEIENPQSQASKADDFEIVPAPATDSSDDSSSDDSEEDVETKAEILAYAKKMLRKKQREQILDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPITKEEIAAMRAQFKEIDARPAKKVAQAKARKKRDAMRKLEKVRKKANAISDQTEISDRSKRKQIEQLYKKAVPKRPKKEYVVAKKGVQVKAGKGKVLVDRRMKKDARKHGMGKAGKGGKTKGKAPKGKGSSKASAKKGRKGNK* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00551 830 MobiDBLite consensus disorder prediction 727 747 - -
Rops3g00551 830 Coils Coil 709 739 - -
Rops3g00551 830 MobiDBLite consensus disorder prediction 442 465 - -
Rops3g00551 830 Pfam Domain of unknown function (DUF3381) 237 387 IPR024576 -
Rops3g00551 830 MobiDBLite consensus disorder prediction 424 441 - -
Rops3g00551 830 Pfam FtsJ-like methyltransferase 24 202 IPR002877 GO:0008168|GO:0032259
Rops3g00551 830 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 803 IPR028589 GO:0008649|GO:0031167
Rops3g00551 830 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 IPR015507 GO:0001510|GO:0008168
Rops3g00551 830 MobiDBLite consensus disorder prediction 709 747 - -
Rops3g00551 830 FunFam AdoMet-dependent rRNA methyltransferase SPB1 21 210 - -
Rops3g00551 830 MobiDBLite consensus disorder prediction 423 465 - -
Rops3g00551 830 MobiDBLite consensus disorder prediction 506 520 - -
Rops3g00551 830 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 204 IPR029063 -
Rops3g00551 830 MobiDBLite consensus disorder prediction 793 830 - -
Rops3g00551 830 MobiDBLite consensus disorder prediction 496 634 - -
Rops3g00551 830 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 7 207 - -
Rops3g00551 830 MobiDBLite consensus disorder prediction 570 592 - -
Rops3g00551 830 MobiDBLite consensus disorder prediction 712 726 - -
Rops3g00551 830 Gene3D Vaccinia Virus protein VP39 21 210 IPR029063 -
Rops3g00551 830 MobiDBLite consensus disorder prediction 778 830 - -
Rops3g00551 830 Pfam Spb1 C-terminal domain 605 797 IPR012920 GO:0005634|GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00551 K14857 - gmx:100790741 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00551 3 6872791 6878526 Rops3g00551 3 6872791 6878526 ECH