Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00550 ATGGAGCCTTCTGATGGAGCCTTGCTACCTACTAAAGGTTCTGATGAGTTCAAACCGTTCATTCGCCGGCTTCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTGTCTTAATAGCATTTGTGATGACTTTCTTTTCTGTATTTGATGTCCCTGTCTTCTGGCCAATATTACTCTGTTACTGGATTGTTCTGTTTGTCCTTACAATGAGGCGCCAAATTGCACACATGATCAAACACAAATATATCCCATTCAACATTGGAAAGCAGAAGTATAGTGGCAAGAAATCTTCTGCTAGTAGCAGTGGCTCTCGTGCAGACTAA 324 0.4136 MEPSDGALLPTKGSDEFKPFIRRLPEFKFWYSFTKAVLIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKHKYIPFNIGKQKYSGKKSSASSSGSRAD* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00550 107 PANTHER PROTEIN RER1 2 100 IPR004932 GO:0016020
Rops3g00550 107 Pfam Rer1 family 4 93 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00550 Rops-Chr3 6866875 6869922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00550 1 107 Miscellaneous Gene Families AT2G21600 87.037 7.94e-66 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00550 - - mnt:21401534 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00550 3 6866875 6869922 Rops3g00550 3 6866875 6869922 ECH