Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00544 ATGGCAGCATCCCATTTCCATGCTCGCTCAAACAGCTTGCCTTCTAGACCACATCCCCTCATTCTACAATGCAATGAACACTTGTACAGGTTAAGAGCTTCCCATGAAACCTCTTCTTCATCTTCATTGCTTAGCCATAAGTTAAGAGGGTTGCAGGATTTGTATGATTGTGTTGAAAATTTGATCCAGCTTTCCCTCACTCAAGAAGCACTTCTCCATGAACCTCAAGAATCATGGGTAGATGAGCTTTTGGATGGATCCTTAAGGCTCTTAGACACGTGCACAGCAGCCAAGGATTCTCTACTTCATACAAAGGAGTGTGTGCGTGAGCTTCAATCAATCATGAGGAGAAGAAGAGGAGGTGAAGATGAGCTCAAGGCAGAGGTTAAAAAGTTCTTGACTTCTAGGAAGGTGGTAAAAAAGGCCATCTCAAAAGCCTTAGCAAATTTGAAGGGTATTGCCAAAAATTGCAACATCTCATCTACAAACAAAGACAATCAAACAGTAGCTTTGATCAAGTTATTAGAAGTTGTGGAAGTGGTCACTTTATCAACATTTCAAGCACTTTTGCAATTTATCTCAGGGACAACACAATCAAAGTCAAGCAGCTGGCTTTTGATTTCCAAGCTAATGCAGTCCAAAAAAGTATCTTGCTCACAATTGGCAGATGAAAGTGAATTTTCCCAACTTGATGAAGCATTGCAATCTTACATGTTTGCCCAAACAACAAGCAAATATGAAAACATGAACAAGTTGCAAAACCACTTGGAGAAACTGGAGTCTCTTATTCAAGACCATGAAGAAGGGCTTGAGTTTCTATTTAGGCTTTTGATTAAGATTAGAGTTGCCCTTCTTAACATCCTCAATCATTAG 873 0.3998 MAASHFHARSNSLPSRPHPLILQCNEHLYRLRASHETSSSSSLLSHKLRGLQDLYDCVENLIQLSLTQEALLHEPQESWVDELLDGSLRLLDTCTAAKDSLLHTKECVRELQSIMRRRRGGEDELKAEVKKFLTSRKVVKKAISKALANLKGIAKNCNISSTNKDNQTVALIKLLEVVEVVTLSTFQALLQFISGTTQSKSSSWLLISKLMQSKKVSCSQLADESEFSQLDEALQSYMFAQTTSKYENMNKLQNHLEKLESLIQDHEEGLEFLFRLLIKIRVALLNILNH* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00544 290 PANTHER OS06G0725500 PROTEIN 2 288 - -
Rops3g00544 290 Coils Coil 249 276 - -
Rops3g00544 290 Pfam Protein BPS1 47 287 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00544 Rops-Chr3 6809461 6810333 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00544 - - gmx:100802945 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00544 3 6809461 6810333 Rops3g00544 3 6809461 6810333 ECH